Gene : Cagra.0686s0047 C. grandiflora v1.1
Defline:  (1 of 46) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  47
Name:  ? Cagra.0686s0047 Secondary Identifier:  ? PAC:28900998
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0047 0.5kb upstream 0.5kb upstream 1816 true Scaffold686: 163788-165603 Capsella grandiflora
Cagra.0686s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 165104-165603 Capsella grandiflora
Cagra.0686s0047 0.5kb downstream 0.5kb downstream 1816 true Scaffold686: 163288-165103 Capsella grandiflora
Cagra.0686s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 163288-163787 Capsella grandiflora
Cagra.0686s0047 1.0kb upstream 1.0kb upstream 2316 true Scaffold686: 163788-166103 Capsella grandiflora
Cagra.0686s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 165104-166103 Capsella grandiflora
Cagra.0686s0047 1.0kb downstream 1.0kb downstream 2316 true Scaffold686: 162788-165103 Capsella grandiflora
Cagra.0686s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 162788-163787 Capsella grandiflora
Cagra.0686s0047 2.0kb upstream 2.0kb upstream 3316 true Scaffold686: 163788-167103 Capsella grandiflora
Cagra.0686s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold686: 165104-167103 Capsella grandiflora
Cagra.0686s0047 2.0kb downstream 2.0kb downstream 3316 true Scaffold686: 161788-165103 Capsella grandiflora
Cagra.0686s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 161788-163787 Capsella grandiflora
Cagra.0686s0047 5.0kb upstream 5.0kb upstream 6316 true Scaffold686: 163788-170103 Capsella grandiflora
Cagra.0686s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold686: 165104-170103 Capsella grandiflora
Cagra.0686s0047 5.0kb downstream 5.0kb downstream 6316 true Scaffold686: 158788-165103 Capsella grandiflora
Cagra.0686s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 158788-163787 Capsella grandiflora
Cagra.0686s0047 10.0kb upstream 10.0kb upstream 11316 true Scaffold686: 163788-175103 Capsella grandiflora
Cagra.0686s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold686: 165104-175103 Capsella grandiflora
Cagra.0686s0047 10.0kb downstream 10.0kb downstream 11316 true Scaffold686: 153788-165103 Capsella grandiflora
Cagra.0686s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 153788-163787 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122375875 5261 Brassicaceae View MSA
123801079 5264 Brassicales-Malvales View MSA
124298420 5266 SBM View MSA
124150069 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain