Gene : Cagra.0686s0037 C. grandiflora v1.1
Defline:  (1 of 46) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  37
Name:  ? Cagra.0686s0037 Secondary Identifier:  ? PAC:28901023
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0037 0.5kb upstream 0.5kb upstream 1812 true Scaffold686: 142084-143895 Capsella grandiflora
Cagra.0686s0037 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 143396-143895 Capsella grandiflora
Cagra.0686s0037 0.5kb downstream 0.5kb downstream 1812 true Scaffold686: 141584-143395 Capsella grandiflora
Cagra.0686s0037 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 141584-142083 Capsella grandiflora
Cagra.0686s0037 1.0kb upstream 1.0kb upstream 2312 true Scaffold686: 142084-144395 Capsella grandiflora
Cagra.0686s0037 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 143396-144395 Capsella grandiflora
Cagra.0686s0037 1.0kb downstream 1.0kb downstream 2312 true Scaffold686: 141084-143395 Capsella grandiflora
Cagra.0686s0037 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 141084-142083 Capsella grandiflora
Cagra.0686s0037 2.0kb upstream 2.0kb upstream 3312 true Scaffold686: 142084-145395 Capsella grandiflora
Cagra.0686s0037 2.0kb upstream 2.0kb upstream 2000 false Scaffold686: 143396-145395 Capsella grandiflora
Cagra.0686s0037 2.0kb downstream 2.0kb downstream 3312 true Scaffold686: 140084-143395 Capsella grandiflora
Cagra.0686s0037 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 140084-142083 Capsella grandiflora
Cagra.0686s0037 5.0kb upstream 5.0kb upstream 6312 true Scaffold686: 142084-148395 Capsella grandiflora
Cagra.0686s0037 5.0kb upstream 5.0kb upstream 5000 false Scaffold686: 143396-148395 Capsella grandiflora
Cagra.0686s0037 5.0kb downstream 5.0kb downstream 6312 true Scaffold686: 137084-143395 Capsella grandiflora
Cagra.0686s0037 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 137084-142083 Capsella grandiflora
Cagra.0686s0037 10.0kb upstream 10.0kb upstream 11312 true Scaffold686: 142084-153395 Capsella grandiflora
Cagra.0686s0037 10.0kb upstream 10.0kb upstream 10000 false Scaffold686: 143396-153395 Capsella grandiflora
Cagra.0686s0037 10.0kb downstream 10.0kb downstream 11312 true Scaffold686: 132084-143395 Capsella grandiflora
Cagra.0686s0037 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 132084-142083 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122379968 5261 Brassicaceae View MSA
123802499 5264 Brassicales-Malvales View MSA
124299689 5266 SBM View MSA
124151030 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain