Gene : Cagra.0686s0081 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10245:SF23 - MULTIPROTEIN-BRIDGING FACTOR 1A-RELATED Genomic Order:  81
Name:  ? Cagra.0686s0081 Secondary Identifier:  ? PAC:28901016
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0081 0.5kb upstream 0.5kb upstream 2116 true Scaffold686: 275244-277359 Capsella grandiflora
Cagra.0686s0081 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 275244-275743 Capsella grandiflora
Cagra.0686s0081 0.5kb downstream 0.5kb downstream 2116 true Scaffold686: 275744-277859 Capsella grandiflora
Cagra.0686s0081 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 277360-277859 Capsella grandiflora
Cagra.0686s0081 1.0kb upstream 1.0kb upstream 2616 true Scaffold686: 274744-277359 Capsella grandiflora
Cagra.0686s0081 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 274744-275743 Capsella grandiflora
Cagra.0686s0081 1.0kb downstream 1.0kb downstream 2616 true Scaffold686: 275744-278359 Capsella grandiflora
Cagra.0686s0081 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 277360-278359 Capsella grandiflora
Cagra.0686s0081 2.0kb upstream 2.0kb upstream 3616 true Scaffold686: 273744-277359 Capsella grandiflora
Cagra.0686s0081 2.0kb upstream 2.0kb upstream 2000 false Scaffold686: 273744-275743 Capsella grandiflora
Cagra.0686s0081 2.0kb downstream 2.0kb downstream 3616 true Scaffold686: 275744-279359 Capsella grandiflora
Cagra.0686s0081 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 277360-279359 Capsella grandiflora
Cagra.0686s0081 5.0kb upstream 5.0kb upstream 6616 true Scaffold686: 270744-277359 Capsella grandiflora
Cagra.0686s0081 5.0kb upstream 5.0kb upstream 5000 false Scaffold686: 270744-275743 Capsella grandiflora
Cagra.0686s0081 5.0kb downstream 5.0kb downstream 6616 true Scaffold686: 275744-282359 Capsella grandiflora
Cagra.0686s0081 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 277360-282359 Capsella grandiflora
Cagra.0686s0081 10.0kb upstream 10.0kb upstream 11616 true Scaffold686: 265744-277359 Capsella grandiflora
Cagra.0686s0081 10.0kb upstream 10.0kb upstream 10000 false Scaffold686: 265744-275743 Capsella grandiflora
Cagra.0686s0081 10.0kb downstream 10.0kb downstream 11616 true Scaffold686: 275744-287359 Capsella grandiflora
Cagra.0686s0081 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 277360-287359 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375656 5261 Brassicaceae View MSA
123839300 5264 Brassicales-Malvales View MSA
124341063 5266 SBM View MSA
124251487 5268 Malvidae View MSA
124061849 5270 Rosid View MSA
123738727 5271 Pentapetalae View MSA
122792809 5272 Eudicot View MSA
122045533 5273 Angiosperm View MSA
121346970 5274 Embryophyte View MSA
123424283 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain