Gene : Cagra.0686s0086 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11671 - ATP SYNTHASE SUBUNIT D Genomic Order:  86
Name:  ? Cagra.0686s0086 Secondary Identifier:  ? PAC:28901020
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0086 0.5kb upstream 0.5kb upstream 2245 true Scaffold686: 287010-289254 Capsella grandiflora
Cagra.0686s0086 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 288755-289254 Capsella grandiflora
Cagra.0686s0086 0.5kb downstream 0.5kb downstream 2245 true Scaffold686: 286510-288754 Capsella grandiflora
Cagra.0686s0086 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 286510-287009 Capsella grandiflora
Cagra.0686s0086 1.0kb upstream 1.0kb upstream 2745 true Scaffold686: 287010-289754 Capsella grandiflora
Cagra.0686s0086 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 288755-289754 Capsella grandiflora
Cagra.0686s0086 1.0kb downstream 1.0kb downstream 2745 true Scaffold686: 286010-288754 Capsella grandiflora
Cagra.0686s0086 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 286010-287009 Capsella grandiflora
Cagra.0686s0086 2.0kb upstream 2.0kb upstream 3745 true Scaffold686: 287010-290754 Capsella grandiflora
Cagra.0686s0086 2.0kb upstream 2.0kb upstream 2000 false Scaffold686: 288755-290754 Capsella grandiflora
Cagra.0686s0086 2.0kb downstream 2.0kb downstream 3745 true Scaffold686: 285010-288754 Capsella grandiflora
Cagra.0686s0086 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 285010-287009 Capsella grandiflora
Cagra.0686s0086 5.0kb upstream 5.0kb upstream 6745 true Scaffold686: 287010-293754 Capsella grandiflora
Cagra.0686s0086 5.0kb upstream 5.0kb upstream 5000 false Scaffold686: 288755-293754 Capsella grandiflora
Cagra.0686s0086 5.0kb downstream 5.0kb downstream 6745 true Scaffold686: 282010-288754 Capsella grandiflora
Cagra.0686s0086 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 282010-287009 Capsella grandiflora
Cagra.0686s0086 10.0kb upstream 10.0kb upstream 11745 true Scaffold686: 287010-298754 Capsella grandiflora
Cagra.0686s0086 10.0kb upstream 10.0kb upstream 10000 false Scaffold686: 288755-298754 Capsella grandiflora
Cagra.0686s0086 10.0kb downstream 10.0kb downstream 11745 true Scaffold686: 277010-288754 Capsella grandiflora
Cagra.0686s0086 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 277010-287009 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375883 5261 Brassicaceae View MSA
123835258 5264 Brassicales-Malvales View MSA
124338244 5266 SBM View MSA
124241593 5268 Malvidae View MSA
124068581 5270 Rosid View MSA
123747153 5271 Pentapetalae View MSA
122793395 5272 Eudicot View MSA
122045398 5273 Angiosperm View MSA
121346383 5274 Embryophyte View MSA
123424080 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain