Gene : Cagra.0664s0078 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23105:SF5 - 39S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL Genomic Order:  78
Name:  ? Cagra.0664s0078 Secondary Identifier:  ? PAC:28911774
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0664s0078 0.5kb upstream 0.5kb upstream 3187 true Scaffold664: 272703-275889 Capsella grandiflora
Cagra.0664s0078 0.5kb upstream 0.5kb upstream 500 false Scaffold664: 272703-273202 Capsella grandiflora
Cagra.0664s0078 0.5kb downstream 0.5kb downstream 3187 true Scaffold664: 273203-276389 Capsella grandiflora
Cagra.0664s0078 0.5kb downstream 0.5kb downstream 500 false Scaffold664: 275890-276389 Capsella grandiflora
Cagra.0664s0078 1.0kb upstream 1.0kb upstream 3687 true Scaffold664: 272203-275889 Capsella grandiflora
Cagra.0664s0078 1.0kb upstream 1.0kb upstream 1000 false Scaffold664: 272203-273202 Capsella grandiflora
Cagra.0664s0078 1.0kb downstream 1.0kb downstream 3687 true Scaffold664: 273203-276889 Capsella grandiflora
Cagra.0664s0078 1.0kb downstream 1.0kb downstream 1000 false Scaffold664: 275890-276889 Capsella grandiflora
Cagra.0664s0078 2.0kb upstream 2.0kb upstream 4687 true Scaffold664: 271203-275889 Capsella grandiflora
Cagra.0664s0078 2.0kb upstream 2.0kb upstream 2000 false Scaffold664: 271203-273202 Capsella grandiflora
Cagra.0664s0078 2.0kb downstream 2.0kb downstream 4687 true Scaffold664: 273203-277889 Capsella grandiflora
Cagra.0664s0078 2.0kb downstream 2.0kb downstream 2000 false Scaffold664: 275890-277889 Capsella grandiflora
Cagra.0664s0078 5.0kb upstream 5.0kb upstream 7687 true Scaffold664: 268203-275889 Capsella grandiflora
Cagra.0664s0078 5.0kb upstream 5.0kb upstream 5000 false Scaffold664: 268203-273202 Capsella grandiflora
Cagra.0664s0078 5.0kb downstream 5.0kb downstream 7687 true Scaffold664: 273203-280889 Capsella grandiflora
Cagra.0664s0078 5.0kb downstream 5.0kb downstream 5000 false Scaffold664: 275890-280889 Capsella grandiflora
Cagra.0664s0078 10.0kb upstream 10.0kb upstream 12687 true Scaffold664: 263203-275889 Capsella grandiflora
Cagra.0664s0078 10.0kb upstream 10.0kb upstream 10000 false Scaffold664: 263203-273202 Capsella grandiflora
Cagra.0664s0078 10.0kb downstream 10.0kb downstream 12687 true Scaffold664: 273203-285889 Capsella grandiflora
Cagra.0664s0078 10.0kb downstream 10.0kb downstream 10000 false Scaffold664: 275890-285889 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374657 5261 Brassicaceae View MSA
123833583 5264 Brassicales-Malvales View MSA
124339501 5266 SBM View MSA
124237610 5268 Malvidae View MSA
124061690 5270 Rosid View MSA
123738207 5271 Pentapetalae View MSA
122788620 5272 Eudicot View MSA
122046833 5273 Angiosperm View MSA
121346612 5274 Embryophyte View MSA
123427528 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain