Gene : Cagra.0664s0080 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11082:SF29 - TRNA-DIHYDROURIDINE SYNTHASE Genomic Order:  80
Name:  ? Cagra.0664s0080 Secondary Identifier:  ? PAC:28911816
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0664s0080 0.5kb upstream 0.5kb upstream 2651 true Scaffold664: 279018-281668 Capsella grandiflora
Cagra.0664s0080 0.5kb upstream 0.5kb upstream 500 false Scaffold664: 279018-279517 Capsella grandiflora
Cagra.0664s0080 0.5kb downstream 0.5kb downstream 2651 true Scaffold664: 279518-282168 Capsella grandiflora
Cagra.0664s0080 0.5kb downstream 0.5kb downstream 500 false Scaffold664: 281669-282168 Capsella grandiflora
Cagra.0664s0080 1.0kb upstream 1.0kb upstream 3151 true Scaffold664: 278518-281668 Capsella grandiflora
Cagra.0664s0080 1.0kb upstream 1.0kb upstream 1000 false Scaffold664: 278518-279517 Capsella grandiflora
Cagra.0664s0080 1.0kb downstream 1.0kb downstream 3151 true Scaffold664: 279518-282668 Capsella grandiflora
Cagra.0664s0080 1.0kb downstream 1.0kb downstream 1000 false Scaffold664: 281669-282668 Capsella grandiflora
Cagra.0664s0080 2.0kb upstream 2.0kb upstream 4151 true Scaffold664: 277518-281668 Capsella grandiflora
Cagra.0664s0080 2.0kb upstream 2.0kb upstream 2000 false Scaffold664: 277518-279517 Capsella grandiflora
Cagra.0664s0080 2.0kb downstream 2.0kb downstream 4151 true Scaffold664: 279518-283668 Capsella grandiflora
Cagra.0664s0080 2.0kb downstream 2.0kb downstream 2000 false Scaffold664: 281669-283668 Capsella grandiflora
Cagra.0664s0080 5.0kb upstream 5.0kb upstream 7151 true Scaffold664: 274518-281668 Capsella grandiflora
Cagra.0664s0080 5.0kb upstream 5.0kb upstream 5000 false Scaffold664: 274518-279517 Capsella grandiflora
Cagra.0664s0080 5.0kb downstream 5.0kb downstream 7151 true Scaffold664: 279518-286668 Capsella grandiflora
Cagra.0664s0080 5.0kb downstream 5.0kb downstream 5000 false Scaffold664: 281669-286668 Capsella grandiflora
Cagra.0664s0080 10.0kb upstream 10.0kb upstream 12151 true Scaffold664: 269518-281668 Capsella grandiflora
Cagra.0664s0080 10.0kb upstream 10.0kb upstream 10000 false Scaffold664: 269518-279517 Capsella grandiflora
Cagra.0664s0080 10.0kb downstream 10.0kb downstream 12151 true Scaffold664: 279518-291668 Capsella grandiflora
Cagra.0664s0080 10.0kb downstream 10.0kb downstream 10000 false Scaffold664: 281669-291668 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361789 5261 Brassicaceae View MSA
123841464 5264 Brassicales-Malvales View MSA
124340622 5266 SBM View MSA
124239918 5268 Malvidae View MSA
124063739 5270 Rosid View MSA
123742826 5271 Pentapetalae View MSA
122786306 5272 Eudicot View MSA
122042083 5273 Angiosperm View MSA
121347615 5274 Embryophyte View MSA
123428841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain