Gene : Cagra.0664s0082 C. grandiflora v1.1
Defline:  (1 of 2) PTHR14155:SF75 - E3 UBIQUITIN LIGASE BIG BROTHER Genomic Order:  82
Name:  ? Cagra.0664s0082 Secondary Identifier:  ? PAC:28911821
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0664s0082 0.5kb upstream 0.5kb upstream 3059 true Scaffold664: 285554-288612 Capsella grandiflora
Cagra.0664s0082 0.5kb upstream 0.5kb upstream 500 false Scaffold664: 288113-288612 Capsella grandiflora
Cagra.0664s0082 0.5kb downstream 0.5kb downstream 3059 true Scaffold664: 285054-288112 Capsella grandiflora
Cagra.0664s0082 0.5kb downstream 0.5kb downstream 500 false Scaffold664: 285054-285553 Capsella grandiflora
Cagra.0664s0082 1.0kb upstream 1.0kb upstream 3559 true Scaffold664: 285554-289112 Capsella grandiflora
Cagra.0664s0082 1.0kb upstream 1.0kb upstream 1000 false Scaffold664: 288113-289112 Capsella grandiflora
Cagra.0664s0082 1.0kb downstream 1.0kb downstream 3559 true Scaffold664: 284554-288112 Capsella grandiflora
Cagra.0664s0082 1.0kb downstream 1.0kb downstream 1000 false Scaffold664: 284554-285553 Capsella grandiflora
Cagra.0664s0082 2.0kb upstream 2.0kb upstream 4559 true Scaffold664: 285554-290112 Capsella grandiflora
Cagra.0664s0082 2.0kb upstream 2.0kb upstream 2000 false Scaffold664: 288113-290112 Capsella grandiflora
Cagra.0664s0082 2.0kb downstream 2.0kb downstream 4559 true Scaffold664: 283554-288112 Capsella grandiflora
Cagra.0664s0082 2.0kb downstream 2.0kb downstream 2000 false Scaffold664: 283554-285553 Capsella grandiflora
Cagra.0664s0082 5.0kb upstream 5.0kb upstream 7559 true Scaffold664: 285554-293112 Capsella grandiflora
Cagra.0664s0082 5.0kb upstream 5.0kb upstream 5000 false Scaffold664: 288113-293112 Capsella grandiflora
Cagra.0664s0082 5.0kb downstream 5.0kb downstream 7559 true Scaffold664: 280554-288112 Capsella grandiflora
Cagra.0664s0082 5.0kb downstream 5.0kb downstream 5000 false Scaffold664: 280554-285553 Capsella grandiflora
Cagra.0664s0082 10.0kb upstream 10.0kb upstream 12559 true Scaffold664: 285554-298112 Capsella grandiflora
Cagra.0664s0082 10.0kb upstream 10.0kb upstream 10000 false Scaffold664: 288113-298112 Capsella grandiflora
Cagra.0664s0082 10.0kb downstream 10.0kb downstream 12559 true Scaffold664: 275554-288112 Capsella grandiflora
Cagra.0664s0082 10.0kb downstream 10.0kb downstream 10000 false Scaffold664: 275554-285553 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367401 5261 Brassicaceae View MSA
123835643 5264 Brassicales-Malvales View MSA
124349516 5266 SBM View MSA
124246466 5268 Malvidae View MSA
124069902 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain