Gene : Cagra.0684s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22601:SF8 - OLIGOPEPTIDE TRANSPORTER 1-RELATED Genomic Order:  1
Name:  ? Cagra.0684s0001 Secondary Identifier:  ? PAC:28908078
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0684s0001 0.5kb upstream 0.5kb upstream 3053 true Scaffold684: 1-3053 Capsella grandiflora
Cagra.0684s0001 0.5kb upstream 0.5kb upstream 369 false Scaffold684: 1-369 Capsella grandiflora
Cagra.0684s0001 0.5kb downstream 0.5kb downstream 3184 true Scaffold684: 370-3553 Capsella grandiflora
Cagra.0684s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold684: 3054-3553 Capsella grandiflora
Cagra.0684s0001 1.0kb upstream 1.0kb upstream 3053 true Scaffold684: 1-3053 Capsella grandiflora
Cagra.0684s0001 1.0kb upstream 1.0kb upstream 369 false Scaffold684: 1-369 Capsella grandiflora
Cagra.0684s0001 1.0kb downstream 1.0kb downstream 3684 true Scaffold684: 370-4053 Capsella grandiflora
Cagra.0684s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold684: 3054-4053 Capsella grandiflora
Cagra.0684s0001 2.0kb upstream 2.0kb upstream 3053 true Scaffold684: 1-3053 Capsella grandiflora
Cagra.0684s0001 2.0kb upstream 2.0kb upstream 369 false Scaffold684: 1-369 Capsella grandiflora
Cagra.0684s0001 2.0kb downstream 2.0kb downstream 4684 true Scaffold684: 370-5053 Capsella grandiflora
Cagra.0684s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold684: 3054-5053 Capsella grandiflora
Cagra.0684s0001 5.0kb upstream 5.0kb upstream 3053 true Scaffold684: 1-3053 Capsella grandiflora
Cagra.0684s0001 5.0kb upstream 5.0kb upstream 369 false Scaffold684: 1-369 Capsella grandiflora
Cagra.0684s0001 5.0kb downstream 5.0kb downstream 7684 true Scaffold684: 370-8053 Capsella grandiflora
Cagra.0684s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold684: 3054-8053 Capsella grandiflora
Cagra.0684s0001 10.0kb upstream 10.0kb upstream 3053 true Scaffold684: 1-3053 Capsella grandiflora
Cagra.0684s0001 10.0kb upstream 10.0kb upstream 369 false Scaffold684: 1-369 Capsella grandiflora
Cagra.0684s0001 10.0kb downstream 10.0kb downstream 12684 true Scaffold684: 370-13053 Capsella grandiflora
Cagra.0684s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold684: 3054-13053 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381638 5261 Brassicaceae View MSA
123836474 5264 Brassicales-Malvales View MSA
124349050 5266 SBM View MSA
124248923 5268 Malvidae View MSA
124065533 5270 Rosid View MSA
123750200 5271 Pentapetalae View MSA
122797569 5272 Eudicot View MSA
122049856 5273 Angiosperm View MSA
121351141 5274 Embryophyte View MSA
123382023 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain