Gene : Cagra.0683s0003 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10788:SF38 - TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED Genomic Order:  3
Name:  ? Cagra.0683s0003 Secondary Identifier:  ? PAC:28914991
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0683s0003 0.5kb upstream 0.5kb upstream 2660 true Scaffold683: 8322-10981 Capsella grandiflora
Cagra.0683s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold683: 8322-8821 Capsella grandiflora
Cagra.0683s0003 0.5kb downstream 0.5kb downstream 2660 true Scaffold683: 8822-11481 Capsella grandiflora
Cagra.0683s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold683: 10982-11481 Capsella grandiflora
Cagra.0683s0003 1.0kb upstream 1.0kb upstream 3160 true Scaffold683: 7822-10981 Capsella grandiflora
Cagra.0683s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold683: 7822-8821 Capsella grandiflora
Cagra.0683s0003 1.0kb downstream 1.0kb downstream 3160 true Scaffold683: 8822-11981 Capsella grandiflora
Cagra.0683s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold683: 10982-11981 Capsella grandiflora
Cagra.0683s0003 2.0kb upstream 2.0kb upstream 4160 true Scaffold683: 6822-10981 Capsella grandiflora
Cagra.0683s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold683: 6822-8821 Capsella grandiflora
Cagra.0683s0003 2.0kb downstream 2.0kb downstream 4160 true Scaffold683: 8822-12981 Capsella grandiflora
Cagra.0683s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold683: 10982-12981 Capsella grandiflora
Cagra.0683s0003 5.0kb upstream 5.0kb upstream 7160 true Scaffold683: 3822-10981 Capsella grandiflora
Cagra.0683s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold683: 3822-8821 Capsella grandiflora
Cagra.0683s0003 5.0kb downstream 5.0kb downstream 7160 true Scaffold683: 8822-15981 Capsella grandiflora
Cagra.0683s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold683: 10982-15981 Capsella grandiflora
Cagra.0683s0003 10.0kb upstream 10.0kb upstream 10981 true Scaffold683: 1-10981 Capsella grandiflora
Cagra.0683s0003 10.0kb upstream 10.0kb upstream 8821 false Scaffold683: 1-8821 Capsella grandiflora
Cagra.0683s0003 10.0kb downstream 10.0kb downstream 12160 true Scaffold683: 8822-20981 Capsella grandiflora
Cagra.0683s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold683: 10982-20981 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363006 5261 Brassicaceae View MSA
123840716 5264 Brassicales-Malvales View MSA
124337045 5266 SBM View MSA
124240902 5268 Malvidae View MSA
124065579 5270 Rosid View MSA
123746570 5271 Pentapetalae View MSA
122792974 5272 Eudicot View MSA
122044363 5273 Angiosperm View MSA
121351669 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain