Gene : Cagra.0684s0015 C. grandiflora v1.1
Defline:  (1 of 7) PTHR11208 - RNA-BINDING PROTEIN RELATED Genomic Order:  15
Name:  ? Cagra.0684s0015 Secondary Identifier:  ? PAC:28908065
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0684s0015 0.5kb upstream 0.5kb upstream 4021 true Scaffold684: 40666-44686 Capsella grandiflora
Cagra.0684s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold684: 40666-41165 Capsella grandiflora
Cagra.0684s0015 0.5kb downstream 0.5kb downstream 4021 true Scaffold684: 41166-45186 Capsella grandiflora
Cagra.0684s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold684: 44687-45186 Capsella grandiflora
Cagra.0684s0015 1.0kb upstream 1.0kb upstream 4521 true Scaffold684: 40166-44686 Capsella grandiflora
Cagra.0684s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold684: 40166-41165 Capsella grandiflora
Cagra.0684s0015 1.0kb downstream 1.0kb downstream 4521 true Scaffold684: 41166-45686 Capsella grandiflora
Cagra.0684s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold684: 44687-45686 Capsella grandiflora
Cagra.0684s0015 2.0kb upstream 2.0kb upstream 5521 true Scaffold684: 39166-44686 Capsella grandiflora
Cagra.0684s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold684: 39166-41165 Capsella grandiflora
Cagra.0684s0015 2.0kb downstream 2.0kb downstream 5521 true Scaffold684: 41166-46686 Capsella grandiflora
Cagra.0684s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold684: 44687-46686 Capsella grandiflora
Cagra.0684s0015 5.0kb upstream 5.0kb upstream 8521 true Scaffold684: 36166-44686 Capsella grandiflora
Cagra.0684s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold684: 36166-41165 Capsella grandiflora
Cagra.0684s0015 5.0kb downstream 5.0kb downstream 8521 true Scaffold684: 41166-49686 Capsella grandiflora
Cagra.0684s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold684: 44687-49686 Capsella grandiflora
Cagra.0684s0015 10.0kb upstream 10.0kb upstream 13521 true Scaffold684: 31166-44686 Capsella grandiflora
Cagra.0684s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold684: 31166-41165 Capsella grandiflora
Cagra.0684s0015 10.0kb downstream 10.0kb downstream 13521 true Scaffold684: 41166-54686 Capsella grandiflora
Cagra.0684s0015 10.0kb downstream 10.0kb downstream 10000 false Scaffold684: 44687-54686 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378419 5261 Brassicaceae View MSA
123840090 5264 Brassicales-Malvales View MSA
124346737 5266 SBM View MSA
124251683 5268 Malvidae View MSA
124061318 5270 Rosid View MSA
123738664 5271 Pentapetalae View MSA
122792934 5272 Eudicot View MSA
122044537 5273 Angiosperm View MSA
121350686 5274 Embryophyte View MSA
123426021 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain