Gene : Cagra.0684s0020 C. grandiflora v1.1
Defline:  (1 of 3) PTHR34562:SF1 - WPP DOMAIN-INTERACTING PROTEIN 2-RELATED Genomic Order:  20
Name:  ? Cagra.0684s0020 Secondary Identifier:  ? PAC:28908070
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0684s0020 0.5kb upstream 0.5kb upstream 2674 true Scaffold684: 53847-56520 Capsella grandiflora
Cagra.0684s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold684: 56021-56520 Capsella grandiflora
Cagra.0684s0020 0.5kb downstream 0.5kb downstream 2674 true Scaffold684: 53347-56020 Capsella grandiflora
Cagra.0684s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold684: 53347-53846 Capsella grandiflora
Cagra.0684s0020 1.0kb upstream 1.0kb upstream 3174 true Scaffold684: 53847-57020 Capsella grandiflora
Cagra.0684s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold684: 56021-57020 Capsella grandiflora
Cagra.0684s0020 1.0kb downstream 1.0kb downstream 3174 true Scaffold684: 52847-56020 Capsella grandiflora
Cagra.0684s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold684: 52847-53846 Capsella grandiflora
Cagra.0684s0020 2.0kb upstream 2.0kb upstream 4174 true Scaffold684: 53847-58020 Capsella grandiflora
Cagra.0684s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold684: 56021-58020 Capsella grandiflora
Cagra.0684s0020 2.0kb downstream 2.0kb downstream 4174 true Scaffold684: 51847-56020 Capsella grandiflora
Cagra.0684s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold684: 51847-53846 Capsella grandiflora
Cagra.0684s0020 5.0kb upstream 5.0kb upstream 7174 true Scaffold684: 53847-61020 Capsella grandiflora
Cagra.0684s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold684: 56021-61020 Capsella grandiflora
Cagra.0684s0020 5.0kb downstream 5.0kb downstream 7174 true Scaffold684: 48847-56020 Capsella grandiflora
Cagra.0684s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold684: 48847-53846 Capsella grandiflora
Cagra.0684s0020 10.0kb upstream 10.0kb upstream 12174 true Scaffold684: 53847-66020 Capsella grandiflora
Cagra.0684s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold684: 56021-66020 Capsella grandiflora
Cagra.0684s0020 10.0kb downstream 10.0kb downstream 12174 true Scaffold684: 43847-56020 Capsella grandiflora
Cagra.0684s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold684: 43847-53846 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365560 5261 Brassicaceae View MSA
123838806 5264 Brassicales-Malvales View MSA
124342230 5266 SBM View MSA
124238840 5268 Malvidae View MSA
124061399 5270 Rosid View MSA
123751814 5271 Pentapetalae View MSA
122794604 5272 Eudicot View MSA
122049938 5273 Angiosperm View MSA
121311655 5274 Embryophyte View MSA
123348925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain