Gene : Cagra.0684s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11538//PTHR11538:SF42 - PHENYLALANYL-TRNA SYNTHETASE Genomic Order:  13
Name:  ? Cagra.0684s0013 Secondary Identifier:  ? PAC:28908073
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0684s0013 0.5kb upstream 0.5kb upstream 1340 true Scaffold684: 37570-38909 Capsella grandiflora
Cagra.0684s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold684: 37570-38069 Capsella grandiflora
Cagra.0684s0013 0.5kb downstream 0.5kb downstream 1340 true Scaffold684: 38070-39409 Capsella grandiflora
Cagra.0684s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold684: 38910-39409 Capsella grandiflora
Cagra.0684s0013 1.0kb upstream 1.0kb upstream 1840 true Scaffold684: 37070-38909 Capsella grandiflora
Cagra.0684s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold684: 37070-38069 Capsella grandiflora
Cagra.0684s0013 1.0kb downstream 1.0kb downstream 1840 true Scaffold684: 38070-39909 Capsella grandiflora
Cagra.0684s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold684: 38910-39909 Capsella grandiflora
Cagra.0684s0013 2.0kb upstream 2.0kb upstream 2840 true Scaffold684: 36070-38909 Capsella grandiflora
Cagra.0684s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold684: 36070-38069 Capsella grandiflora
Cagra.0684s0013 2.0kb downstream 2.0kb downstream 2840 true Scaffold684: 38070-40909 Capsella grandiflora
Cagra.0684s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold684: 38910-40909 Capsella grandiflora
Cagra.0684s0013 5.0kb upstream 5.0kb upstream 5840 true Scaffold684: 33070-38909 Capsella grandiflora
Cagra.0684s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold684: 33070-38069 Capsella grandiflora
Cagra.0684s0013 5.0kb downstream 5.0kb downstream 5840 true Scaffold684: 38070-43909 Capsella grandiflora
Cagra.0684s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold684: 38910-43909 Capsella grandiflora
Cagra.0684s0013 10.0kb upstream 10.0kb upstream 10840 true Scaffold684: 28070-38909 Capsella grandiflora
Cagra.0684s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold684: 28070-38069 Capsella grandiflora
Cagra.0684s0013 10.0kb downstream 10.0kb downstream 10840 true Scaffold684: 38070-48909 Capsella grandiflora
Cagra.0684s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold684: 38910-48909 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029703 5273 Angiosperm View MSA
122371669 5261 Brassicaceae View MSA
123837497 5264 Brassicales-Malvales View MSA
124343159 5266 SBM View MSA
124250721 5268 Malvidae View MSA
124074900 5270 Rosid View MSA
123750465 5271 Pentapetalae View MSA
122797518 5272 Eudicot View MSA
121349631 5274 Embryophyte View MSA
123425246 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain