Gene : Cagra.0891s0016 C. grandiflora v1.1
Defline:  (1 of 1) 3.5.2.17 - Hydroxyisourate hydrolase / HIUHase Genomic Order:  16
Name:  ? Cagra.0891s0016 Secondary Identifier:  ? PAC:28912954
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5691 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0891s0016 0.5kb upstream 0.5kb upstream 1905 true Scaffold891: 56592-58496 Capsella grandiflora
Cagra.0891s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold891: 57997-58496 Capsella grandiflora
Cagra.0891s0016 0.5kb downstream 0.5kb downstream 1905 true Scaffold891: 56092-57996 Capsella grandiflora
Cagra.0891s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold891: 56092-56591 Capsella grandiflora
Cagra.0891s0016 1.0kb upstream 1.0kb upstream 2405 true Scaffold891: 56592-58996 Capsella grandiflora
Cagra.0891s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold891: 57997-58996 Capsella grandiflora
Cagra.0891s0016 1.0kb downstream 1.0kb downstream 2405 true Scaffold891: 55592-57996 Capsella grandiflora
Cagra.0891s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold891: 55592-56591 Capsella grandiflora
Cagra.0891s0016 2.0kb upstream 2.0kb upstream 3405 true Scaffold891: 56592-59996 Capsella grandiflora
Cagra.0891s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold891: 57997-59996 Capsella grandiflora
Cagra.0891s0016 2.0kb downstream 2.0kb downstream 3405 true Scaffold891: 54592-57996 Capsella grandiflora
Cagra.0891s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold891: 54592-56591 Capsella grandiflora
Cagra.0891s0016 5.0kb upstream 5.0kb upstream 6405 true Scaffold891: 56592-62996 Capsella grandiflora
Cagra.0891s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold891: 57997-62996 Capsella grandiflora
Cagra.0891s0016 5.0kb downstream 5.0kb downstream 6405 true Scaffold891: 51592-57996 Capsella grandiflora
Cagra.0891s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold891: 51592-56591 Capsella grandiflora
Cagra.0891s0016 10.0kb upstream 10.0kb upstream 11405 true Scaffold891: 56592-67996 Capsella grandiflora
Cagra.0891s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold891: 57997-67996 Capsella grandiflora
Cagra.0891s0016 10.0kb downstream 10.0kb downstream 11405 true Scaffold891: 46592-57996 Capsella grandiflora
Cagra.0891s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold891: 46592-56591 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365855 5261 Brassicaceae View MSA
123830114 5264 Brassicales-Malvales View MSA
124345076 5266 SBM View MSA
124242249 5268 Malvidae View MSA
124064202 5270 Rosid View MSA
123738377 5271 Pentapetalae View MSA
122792978 5272 Eudicot View MSA
122045927 5273 Angiosperm View MSA
121344098 5274 Embryophyte View MSA
123423784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain