Gene : Cagra.0891s0017 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22850:SF82 - HISTONE-BINDING PROTEIN RBBP7 Genomic Order:  17
Name:  ? Cagra.0891s0017 Secondary Identifier:  ? PAC:28912857
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0891s0017 0.5kb upstream 0.5kb upstream 2427 true Scaffold891: 57758-60184 Capsella grandiflora
Cagra.0891s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold891: 57758-58257 Capsella grandiflora
Cagra.0891s0017 0.5kb downstream 0.5kb downstream 2427 true Scaffold891: 58258-60684 Capsella grandiflora
Cagra.0891s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold891: 60185-60684 Capsella grandiflora
Cagra.0891s0017 1.0kb upstream 1.0kb upstream 2927 true Scaffold891: 57258-60184 Capsella grandiflora
Cagra.0891s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold891: 57258-58257 Capsella grandiflora
Cagra.0891s0017 1.0kb downstream 1.0kb downstream 2927 true Scaffold891: 58258-61184 Capsella grandiflora
Cagra.0891s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold891: 60185-61184 Capsella grandiflora
Cagra.0891s0017 2.0kb upstream 2.0kb upstream 3927 true Scaffold891: 56258-60184 Capsella grandiflora
Cagra.0891s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold891: 56258-58257 Capsella grandiflora
Cagra.0891s0017 2.0kb downstream 2.0kb downstream 3927 true Scaffold891: 58258-62184 Capsella grandiflora
Cagra.0891s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold891: 60185-62184 Capsella grandiflora
Cagra.0891s0017 5.0kb upstream 5.0kb upstream 6927 true Scaffold891: 53258-60184 Capsella grandiflora
Cagra.0891s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold891: 53258-58257 Capsella grandiflora
Cagra.0891s0017 5.0kb downstream 5.0kb downstream 6927 true Scaffold891: 58258-65184 Capsella grandiflora
Cagra.0891s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold891: 60185-65184 Capsella grandiflora
Cagra.0891s0017 10.0kb upstream 10.0kb upstream 11927 true Scaffold891: 48258-60184 Capsella grandiflora
Cagra.0891s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold891: 48258-58257 Capsella grandiflora
Cagra.0891s0017 10.0kb downstream 10.0kb downstream 11927 true Scaffold891: 58258-70184 Capsella grandiflora
Cagra.0891s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold891: 60185-70184 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360238 5261 Brassicaceae View MSA
123833071 5264 Brassicales-Malvales View MSA
124336573 5266 SBM View MSA
124249627 5268 Malvidae View MSA
124068970 5270 Rosid View MSA
123736700 5271 Pentapetalae View MSA
122793488 5272 Eudicot View MSA
122044836 5273 Angiosperm View MSA
121350438 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain