Gene : Cagra.0891s0056 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24098:SF4 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-RELATED Genomic Order:  56
Name:  ? Cagra.0891s0056 Secondary Identifier:  ? PAC:28912908
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0891s0056 0.5kb upstream 0.5kb upstream 5902 true Scaffold891: 199190-205091 Capsella grandiflora
Cagra.0891s0056 0.5kb upstream 0.5kb upstream 500 false Scaffold891: 204592-205091 Capsella grandiflora
Cagra.0891s0056 0.5kb downstream 0.5kb downstream 5902 true Scaffold891: 198690-204591 Capsella grandiflora
Cagra.0891s0056 0.5kb downstream 0.5kb downstream 500 false Scaffold891: 198690-199189 Capsella grandiflora
Cagra.0891s0056 1.0kb upstream 1.0kb upstream 6402 true Scaffold891: 199190-205591 Capsella grandiflora
Cagra.0891s0056 1.0kb upstream 1.0kb upstream 1000 false Scaffold891: 204592-205591 Capsella grandiflora
Cagra.0891s0056 1.0kb downstream 1.0kb downstream 6402 true Scaffold891: 198190-204591 Capsella grandiflora
Cagra.0891s0056 1.0kb downstream 1.0kb downstream 1000 false Scaffold891: 198190-199189 Capsella grandiflora
Cagra.0891s0056 2.0kb upstream 2.0kb upstream 7402 true Scaffold891: 199190-206591 Capsella grandiflora
Cagra.0891s0056 2.0kb upstream 2.0kb upstream 2000 false Scaffold891: 204592-206591 Capsella grandiflora
Cagra.0891s0056 2.0kb downstream 2.0kb downstream 7402 true Scaffold891: 197190-204591 Capsella grandiflora
Cagra.0891s0056 2.0kb downstream 2.0kb downstream 2000 false Scaffold891: 197190-199189 Capsella grandiflora
Cagra.0891s0056 5.0kb upstream 5.0kb upstream 10402 true Scaffold891: 199190-209591 Capsella grandiflora
Cagra.0891s0056 5.0kb upstream 5.0kb upstream 5000 false Scaffold891: 204592-209591 Capsella grandiflora
Cagra.0891s0056 5.0kb downstream 5.0kb downstream 10402 true Scaffold891: 194190-204591 Capsella grandiflora
Cagra.0891s0056 5.0kb downstream 5.0kb downstream 5000 false Scaffold891: 194190-199189 Capsella grandiflora
Cagra.0891s0056 10.0kb upstream 10.0kb upstream 15402 true Scaffold891: 199190-214591 Capsella grandiflora
Cagra.0891s0056 10.0kb upstream 10.0kb upstream 10000 false Scaffold891: 204592-214591 Capsella grandiflora
Cagra.0891s0056 10.0kb downstream 10.0kb downstream 15402 true Scaffold891: 189190-204591 Capsella grandiflora
Cagra.0891s0056 10.0kb downstream 10.0kb downstream 10000 false Scaffold891: 189190-199189 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364177 5261 Brassicaceae View MSA
123832187 5264 Brassicales-Malvales View MSA
124345630 5266 SBM View MSA
124248675 5268 Malvidae View MSA
124072957 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain