Gene : Cagra.0891s0050 C. grandiflora v1.1
Defline:  (1 of 2) KOG4453 - Predicted ER membrane protein Genomic Order:  50
Name:  ? Cagra.0891s0050 Secondary Identifier:  ? PAC:28912953
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0891s0050 0.5kb upstream 0.5kb upstream 2853 true Scaffold891: 180693-183545 Capsella grandiflora
Cagra.0891s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold891: 180693-181192 Capsella grandiflora
Cagra.0891s0050 0.5kb downstream 0.5kb downstream 2853 true Scaffold891: 181193-184045 Capsella grandiflora
Cagra.0891s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold891: 183546-184045 Capsella grandiflora
Cagra.0891s0050 1.0kb upstream 1.0kb upstream 3353 true Scaffold891: 180193-183545 Capsella grandiflora
Cagra.0891s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold891: 180193-181192 Capsella grandiflora
Cagra.0891s0050 1.0kb downstream 1.0kb downstream 3353 true Scaffold891: 181193-184545 Capsella grandiflora
Cagra.0891s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold891: 183546-184545 Capsella grandiflora
Cagra.0891s0050 2.0kb upstream 2.0kb upstream 4353 true Scaffold891: 179193-183545 Capsella grandiflora
Cagra.0891s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold891: 179193-181192 Capsella grandiflora
Cagra.0891s0050 2.0kb downstream 2.0kb downstream 4353 true Scaffold891: 181193-185545 Capsella grandiflora
Cagra.0891s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold891: 183546-185545 Capsella grandiflora
Cagra.0891s0050 5.0kb upstream 5.0kb upstream 7353 true Scaffold891: 176193-183545 Capsella grandiflora
Cagra.0891s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold891: 176193-181192 Capsella grandiflora
Cagra.0891s0050 5.0kb downstream 5.0kb downstream 7353 true Scaffold891: 181193-188545 Capsella grandiflora
Cagra.0891s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold891: 183546-188545 Capsella grandiflora
Cagra.0891s0050 10.0kb upstream 10.0kb upstream 12353 true Scaffold891: 171193-183545 Capsella grandiflora
Cagra.0891s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold891: 171193-181192 Capsella grandiflora
Cagra.0891s0050 10.0kb downstream 10.0kb downstream 12353 true Scaffold891: 181193-193545 Capsella grandiflora
Cagra.0891s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold891: 183546-193545 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378110 5261 Brassicaceae View MSA
123838706 5264 Brassicales-Malvales View MSA
124340752 5266 SBM View MSA
124253142 5268 Malvidae View MSA
124063182 5270 Rosid View MSA
123745519 5271 Pentapetalae View MSA
122787796 5272 Eudicot View MSA
122045453 5273 Angiosperm View MSA
121348476 5274 Embryophyte View MSA
123428042 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain