Gene : Cagra.0891s0062 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10336:SF105 - PHOSPHOINOSITIDE PHOSPHOLIPASE C 1-RELATED Genomic Order:  62
Name:  ? Cagra.0891s0062 Secondary Identifier:  ? PAC:28912916
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora LIPASYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-6351 Capsella grandiflora pathologic  
Cgrandiflora PWY-6367 Capsella grandiflora pathologic  
Cgrandiflora PWY-7039 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0891s0062 0.5kb upstream 0.5kb upstream 3087 true Scaffold891: 219327-222413 Capsella grandiflora
Cagra.0891s0062 0.5kb upstream 0.5kb upstream 500 false Scaffold891: 221914-222413 Capsella grandiflora
Cagra.0891s0062 0.5kb downstream 0.5kb downstream 3087 true Scaffold891: 218827-221913 Capsella grandiflora
Cagra.0891s0062 0.5kb downstream 0.5kb downstream 500 false Scaffold891: 218827-219326 Capsella grandiflora
Cagra.0891s0062 1.0kb upstream 1.0kb upstream 3587 true Scaffold891: 219327-222913 Capsella grandiflora
Cagra.0891s0062 1.0kb upstream 1.0kb upstream 1000 false Scaffold891: 221914-222913 Capsella grandiflora
Cagra.0891s0062 1.0kb downstream 1.0kb downstream 3587 true Scaffold891: 218327-221913 Capsella grandiflora
Cagra.0891s0062 1.0kb downstream 1.0kb downstream 1000 false Scaffold891: 218327-219326 Capsella grandiflora
Cagra.0891s0062 2.0kb upstream 2.0kb upstream 4587 true Scaffold891: 219327-223913 Capsella grandiflora
Cagra.0891s0062 2.0kb upstream 2.0kb upstream 2000 false Scaffold891: 221914-223913 Capsella grandiflora
Cagra.0891s0062 2.0kb downstream 2.0kb downstream 4587 true Scaffold891: 217327-221913 Capsella grandiflora
Cagra.0891s0062 2.0kb downstream 2.0kb downstream 2000 false Scaffold891: 217327-219326 Capsella grandiflora
Cagra.0891s0062 5.0kb upstream 5.0kb upstream 7587 true Scaffold891: 219327-226913 Capsella grandiflora
Cagra.0891s0062 5.0kb upstream 5.0kb upstream 5000 false Scaffold891: 221914-226913 Capsella grandiflora
Cagra.0891s0062 5.0kb downstream 5.0kb downstream 7587 true Scaffold891: 214327-221913 Capsella grandiflora
Cagra.0891s0062 5.0kb downstream 5.0kb downstream 5000 false Scaffold891: 214327-219326 Capsella grandiflora
Cagra.0891s0062 10.0kb upstream 10.0kb upstream 12587 true Scaffold891: 219327-231913 Capsella grandiflora
Cagra.0891s0062 10.0kb upstream 10.0kb upstream 10000 false Scaffold891: 221914-231913 Capsella grandiflora
Cagra.0891s0062 10.0kb downstream 10.0kb downstream 12587 true Scaffold891: 209327-221913 Capsella grandiflora
Cagra.0891s0062 10.0kb downstream 10.0kb downstream 10000 false Scaffold891: 209327-219326 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792751 5273 Angiosperm View MSA
122363671 5261 Brassicaceae View MSA
123835574 5264 Brassicales-Malvales View MSA
124349401 5266 SBM View MSA
124246410 5268 Malvidae View MSA
124071681 5270 Rosid View MSA
123628037 5271 Pentapetalae View MSA
122798488 5272 Eudicot View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain