Gene : Cagra.0876s0032 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10285:SF76 - URIDINE KINASE Genomic Order:  32
Name:  ? Cagra.0876s0032 Secondary Identifier:  ? PAC:28899220
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7193 Capsella grandiflora pathologic  
Cgrandiflora PWY-7196 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0876s0032 0.5kb upstream 0.5kb upstream 4631 true Scaffold876: 109213-113843 Capsella grandiflora
Cagra.0876s0032 0.5kb upstream 0.5kb upstream 500 false Scaffold876: 113344-113843 Capsella grandiflora
Cagra.0876s0032 0.5kb downstream 0.5kb downstream 4631 true Scaffold876: 108713-113343 Capsella grandiflora
Cagra.0876s0032 0.5kb downstream 0.5kb downstream 500 false Scaffold876: 108713-109212 Capsella grandiflora
Cagra.0876s0032 1.0kb upstream 1.0kb upstream 5131 true Scaffold876: 109213-114343 Capsella grandiflora
Cagra.0876s0032 1.0kb upstream 1.0kb upstream 1000 false Scaffold876: 113344-114343 Capsella grandiflora
Cagra.0876s0032 1.0kb downstream 1.0kb downstream 5131 true Scaffold876: 108213-113343 Capsella grandiflora
Cagra.0876s0032 1.0kb downstream 1.0kb downstream 1000 false Scaffold876: 108213-109212 Capsella grandiflora
Cagra.0876s0032 2.0kb upstream 2.0kb upstream 6131 true Scaffold876: 109213-115343 Capsella grandiflora
Cagra.0876s0032 2.0kb upstream 2.0kb upstream 2000 false Scaffold876: 113344-115343 Capsella grandiflora
Cagra.0876s0032 2.0kb downstream 2.0kb downstream 6131 true Scaffold876: 107213-113343 Capsella grandiflora
Cagra.0876s0032 2.0kb downstream 2.0kb downstream 2000 false Scaffold876: 107213-109212 Capsella grandiflora
Cagra.0876s0032 5.0kb upstream 5.0kb upstream 9131 true Scaffold876: 109213-118343 Capsella grandiflora
Cagra.0876s0032 5.0kb upstream 5.0kb upstream 5000 false Scaffold876: 113344-118343 Capsella grandiflora
Cagra.0876s0032 5.0kb downstream 5.0kb downstream 9131 true Scaffold876: 104213-113343 Capsella grandiflora
Cagra.0876s0032 5.0kb downstream 5.0kb downstream 5000 false Scaffold876: 104213-109212 Capsella grandiflora
Cagra.0876s0032 10.0kb upstream 10.0kb upstream 14131 true Scaffold876: 109213-123343 Capsella grandiflora
Cagra.0876s0032 10.0kb upstream 10.0kb upstream 10000 false Scaffold876: 113344-123343 Capsella grandiflora
Cagra.0876s0032 10.0kb downstream 10.0kb downstream 14131 true Scaffold876: 99213-113343 Capsella grandiflora
Cagra.0876s0032 10.0kb downstream 10.0kb downstream 10000 false Scaffold876: 99213-109212 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367014 5261 Brassicaceae View MSA
123830344 5264 Brassicales-Malvales View MSA
124341363 5266 SBM View MSA
124243997 5268 Malvidae View MSA
124070976 5270 Rosid View MSA
123746405 5271 Pentapetalae View MSA
122786866 5272 Eudicot View MSA
122043584 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain