Gene : Cagra.0876s0033 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33209:SF1 - SERINE PROTEASE SPPA, CHLOROPLASTIC Genomic Order:  33
Name:  ? Cagra.0876s0033 Secondary Identifier:  ? PAC:28899212
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0876s0033 0.5kb upstream 0.5kb upstream 4773 true Scaffold876: 113188-117960 Capsella grandiflora
Cagra.0876s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold876: 113188-113687 Capsella grandiflora
Cagra.0876s0033 0.5kb downstream 0.5kb downstream 4773 true Scaffold876: 113688-118460 Capsella grandiflora
Cagra.0876s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold876: 117961-118460 Capsella grandiflora
Cagra.0876s0033 1.0kb upstream 1.0kb upstream 5273 true Scaffold876: 112688-117960 Capsella grandiflora
Cagra.0876s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold876: 112688-113687 Capsella grandiflora
Cagra.0876s0033 1.0kb downstream 1.0kb downstream 5273 true Scaffold876: 113688-118960 Capsella grandiflora
Cagra.0876s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold876: 117961-118960 Capsella grandiflora
Cagra.0876s0033 2.0kb upstream 2.0kb upstream 6273 true Scaffold876: 111688-117960 Capsella grandiflora
Cagra.0876s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold876: 111688-113687 Capsella grandiflora
Cagra.0876s0033 2.0kb downstream 2.0kb downstream 6273 true Scaffold876: 113688-119960 Capsella grandiflora
Cagra.0876s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold876: 117961-119960 Capsella grandiflora
Cagra.0876s0033 5.0kb upstream 5.0kb upstream 9273 true Scaffold876: 108688-117960 Capsella grandiflora
Cagra.0876s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold876: 108688-113687 Capsella grandiflora
Cagra.0876s0033 5.0kb downstream 5.0kb downstream 9273 true Scaffold876: 113688-122960 Capsella grandiflora
Cagra.0876s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold876: 117961-122960 Capsella grandiflora
Cagra.0876s0033 10.0kb upstream 10.0kb upstream 14273 true Scaffold876: 103688-117960 Capsella grandiflora
Cagra.0876s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold876: 103688-113687 Capsella grandiflora
Cagra.0876s0033 10.0kb downstream 10.0kb downstream 14273 true Scaffold876: 113688-127960 Capsella grandiflora
Cagra.0876s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold876: 117961-127960 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372718 5261 Brassicaceae View MSA
123833964 5264 Brassicales-Malvales View MSA
124336701 5266 SBM View MSA
124243419 5268 Malvidae View MSA
124067655 5270 Rosid View MSA
123738820 5271 Pentapetalae View MSA
122785684 5272 Eudicot View MSA
122045424 5273 Angiosperm View MSA
121344928 5274 Embryophyte View MSA
123424112 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain