Gene : Cagra.0876s0038 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11902:SF8 - ENOLASE 1, CHLOROPLASTIC Genomic Order:  38
Name:  ? Cagra.0876s0038 Secondary Identifier:  ? PAC:28899209
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ANAEROFRUCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora ANAGLYCOLYSIS-PWY Capsella grandiflora pathologic  
Cgrandiflora GLUCONEO-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-1042 Capsella grandiflora pathologic  
Cgrandiflora PWY-5464 Capsella grandiflora pathologic  
Cgrandiflora PWY-5723 Capsella grandiflora pathologic  
Cgrandiflora PWY66-399 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0876s0038 0.5kb upstream 0.5kb upstream 3339 true Scaffold876: 130067-133405 Capsella grandiflora
Cagra.0876s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold876: 132906-133405 Capsella grandiflora
Cagra.0876s0038 0.5kb downstream 0.5kb downstream 3339 true Scaffold876: 129567-132905 Capsella grandiflora
Cagra.0876s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold876: 129567-130066 Capsella grandiflora
Cagra.0876s0038 1.0kb upstream 1.0kb upstream 3839 true Scaffold876: 130067-133905 Capsella grandiflora
Cagra.0876s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold876: 132906-133905 Capsella grandiflora
Cagra.0876s0038 1.0kb downstream 1.0kb downstream 3839 true Scaffold876: 129067-132905 Capsella grandiflora
Cagra.0876s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold876: 129067-130066 Capsella grandiflora
Cagra.0876s0038 2.0kb upstream 2.0kb upstream 4839 true Scaffold876: 130067-134905 Capsella grandiflora
Cagra.0876s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold876: 132906-134905 Capsella grandiflora
Cagra.0876s0038 2.0kb downstream 2.0kb downstream 4839 true Scaffold876: 128067-132905 Capsella grandiflora
Cagra.0876s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold876: 128067-130066 Capsella grandiflora
Cagra.0876s0038 5.0kb upstream 5.0kb upstream 7839 true Scaffold876: 130067-137905 Capsella grandiflora
Cagra.0876s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold876: 132906-137905 Capsella grandiflora
Cagra.0876s0038 5.0kb downstream 5.0kb downstream 7839 true Scaffold876: 125067-132905 Capsella grandiflora
Cagra.0876s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold876: 125067-130066 Capsella grandiflora
Cagra.0876s0038 10.0kb upstream 10.0kb upstream 12839 true Scaffold876: 130067-142905 Capsella grandiflora
Cagra.0876s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold876: 132906-142905 Capsella grandiflora
Cagra.0876s0038 10.0kb downstream 10.0kb downstream 12839 true Scaffold876: 120067-132905 Capsella grandiflora
Cagra.0876s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold876: 120067-130066 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360849 5261 Brassicaceae View MSA
123832191 5264 Brassicales-Malvales View MSA
124346575 5266 SBM View MSA
124238827 5268 Malvidae View MSA
124066829 5270 Rosid View MSA
123740119 5271 Pentapetalae View MSA
122788691 5272 Eudicot View MSA
122046731 5273 Angiosperm View MSA
121344971 5274 Embryophyte View MSA
123427139 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain