Gene : Cagra.0878s0007 C. grandiflora v1.1
Defline:  (1 of 2) 1.4.7.1 - Glutamate synthase (ferredoxin) / Ferredoxin-dependent glutamate synthase Genomic Order:  7
Name:  ? Cagra.0878s0007 Secondary Identifier:  ? PAC:28911203
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora CITRULBIO-PWY Capsella grandiflora pathologic  
Cgrandiflora GLUTAMINDEG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-3282 Capsella grandiflora pathologic  
Cgrandiflora PWY-4341 Capsella grandiflora pathologic  
Cgrandiflora PWY-6549 Capsella grandiflora pathologic  
Cgrandiflora PWY-6964 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0878s0007 0.5kb upstream 0.5kb upstream 9002 true Scaffold878: 15945-24946 Capsella grandiflora
Cagra.0878s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold878: 24447-24946 Capsella grandiflora
Cagra.0878s0007 0.5kb downstream 0.5kb downstream 9002 true Scaffold878: 15445-24446 Capsella grandiflora
Cagra.0878s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold878: 15445-15944 Capsella grandiflora
Cagra.0878s0007 1.0kb upstream 1.0kb upstream 9502 true Scaffold878: 15945-25446 Capsella grandiflora
Cagra.0878s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold878: 24447-25446 Capsella grandiflora
Cagra.0878s0007 1.0kb downstream 1.0kb downstream 9502 true Scaffold878: 14945-24446 Capsella grandiflora
Cagra.0878s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold878: 14945-15944 Capsella grandiflora
Cagra.0878s0007 2.0kb upstream 2.0kb upstream 10502 true Scaffold878: 15945-26446 Capsella grandiflora
Cagra.0878s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold878: 24447-26446 Capsella grandiflora
Cagra.0878s0007 2.0kb downstream 2.0kb downstream 10502 true Scaffold878: 13945-24446 Capsella grandiflora
Cagra.0878s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold878: 13945-15944 Capsella grandiflora
Cagra.0878s0007 5.0kb upstream 5.0kb upstream 13502 true Scaffold878: 15945-29446 Capsella grandiflora
Cagra.0878s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold878: 24447-29446 Capsella grandiflora
Cagra.0878s0007 5.0kb downstream 5.0kb downstream 13502 true Scaffold878: 10945-24446 Capsella grandiflora
Cagra.0878s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold878: 10945-15944 Capsella grandiflora
Cagra.0878s0007 10.0kb upstream 10.0kb upstream 18502 true Scaffold878: 15945-34446 Capsella grandiflora
Cagra.0878s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold878: 24447-34446 Capsella grandiflora
Cagra.0878s0007 10.0kb downstream 10.0kb downstream 18502 true Scaffold878: 5945-24446 Capsella grandiflora
Cagra.0878s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold878: 5945-15944 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041031 5273 Angiosperm View MSA
122374440 5261 Brassicaceae View MSA
123831579 5264 Brassicales-Malvales View MSA
124341671 5266 SBM View MSA
124239263 5268 Malvidae View MSA
124064283 5270 Rosid View MSA
123736436 5271 Pentapetalae View MSA
122793515 5272 Eudicot View MSA
121351458 5274 Embryophyte View MSA
123425051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain