Gene : Cagra.0882s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23042:SF25 - TRANSCRIPTION FACTOR NAI1 Genomic Order:  6
Name:  ? Cagra.0882s0006 Secondary Identifier:  ? PAC:28909859
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0882s0006 0.5kb upstream 0.5kb upstream 1811 true Scaffold882: 27842-29652 Capsella grandiflora
Cagra.0882s0006 0.5kb upstream 0.5kb upstream 117 false Scaffold882: 29536-29652 Capsella grandiflora
Cagra.0882s0006 0.5kb downstream 0.5kb downstream 2194 true Scaffold882: 27342-29535 Capsella grandiflora
Cagra.0882s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold882: 27342-27841 Capsella grandiflora
Cagra.0882s0006 1.0kb upstream 1.0kb upstream 1811 true Scaffold882: 27842-29652 Capsella grandiflora
Cagra.0882s0006 1.0kb upstream 1.0kb upstream 117 false Scaffold882: 29536-29652 Capsella grandiflora
Cagra.0882s0006 1.0kb downstream 1.0kb downstream 2694 true Scaffold882: 26842-29535 Capsella grandiflora
Cagra.0882s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold882: 26842-27841 Capsella grandiflora
Cagra.0882s0006 2.0kb upstream 2.0kb upstream 1811 true Scaffold882: 27842-29652 Capsella grandiflora
Cagra.0882s0006 2.0kb upstream 2.0kb upstream 117 false Scaffold882: 29536-29652 Capsella grandiflora
Cagra.0882s0006 2.0kb downstream 2.0kb downstream 3694 true Scaffold882: 25842-29535 Capsella grandiflora
Cagra.0882s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold882: 25842-27841 Capsella grandiflora
Cagra.0882s0006 5.0kb upstream 5.0kb upstream 1811 true Scaffold882: 27842-29652 Capsella grandiflora
Cagra.0882s0006 5.0kb upstream 5.0kb upstream 117 false Scaffold882: 29536-29652 Capsella grandiflora
Cagra.0882s0006 5.0kb downstream 5.0kb downstream 6694 true Scaffold882: 22842-29535 Capsella grandiflora
Cagra.0882s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold882: 22842-27841 Capsella grandiflora
Cagra.0882s0006 10.0kb upstream 10.0kb upstream 1811 true Scaffold882: 27842-29652 Capsella grandiflora
Cagra.0882s0006 10.0kb upstream 10.0kb upstream 117 false Scaffold882: 29536-29652 Capsella grandiflora
Cagra.0882s0006 10.0kb downstream 10.0kb downstream 11694 true Scaffold882: 17842-29535 Capsella grandiflora
Cagra.0882s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold882: 17842-27841 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369629 5261 Brassicaceae View MSA
123799813 5264 Brassicales-Malvales View MSA
124297296 5266 SBM View MSA
124149225 5268 Malvidae View MSA
124070459 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain