Gene : Cagra.0884s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22536 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN Genomic Order:  9
Name:  ? Cagra.0884s0009 Secondary Identifier:  ? PAC:28903877
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0884s0009 0.5kb upstream 0.5kb upstream 3742 true Scaffold884: 34448-38189 Capsella grandiflora
Cagra.0884s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold884: 34448-34947 Capsella grandiflora
Cagra.0884s0009 0.5kb downstream 0.5kb downstream 3742 true Scaffold884: 34948-38689 Capsella grandiflora
Cagra.0884s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold884: 38190-38689 Capsella grandiflora
Cagra.0884s0009 1.0kb upstream 1.0kb upstream 4242 true Scaffold884: 33948-38189 Capsella grandiflora
Cagra.0884s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold884: 33948-34947 Capsella grandiflora
Cagra.0884s0009 1.0kb downstream 1.0kb downstream 4242 true Scaffold884: 34948-39189 Capsella grandiflora
Cagra.0884s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold884: 38190-39189 Capsella grandiflora
Cagra.0884s0009 2.0kb upstream 2.0kb upstream 5242 true Scaffold884: 32948-38189 Capsella grandiflora
Cagra.0884s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold884: 32948-34947 Capsella grandiflora
Cagra.0884s0009 2.0kb downstream 2.0kb downstream 5242 true Scaffold884: 34948-40189 Capsella grandiflora
Cagra.0884s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold884: 38190-40189 Capsella grandiflora
Cagra.0884s0009 5.0kb upstream 5.0kb upstream 8242 true Scaffold884: 29948-38189 Capsella grandiflora
Cagra.0884s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold884: 29948-34947 Capsella grandiflora
Cagra.0884s0009 5.0kb downstream 5.0kb downstream 8242 true Scaffold884: 34948-43189 Capsella grandiflora
Cagra.0884s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold884: 38190-43189 Capsella grandiflora
Cagra.0884s0009 10.0kb upstream 10.0kb upstream 13242 true Scaffold884: 24948-38189 Capsella grandiflora
Cagra.0884s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold884: 24948-34947 Capsella grandiflora
Cagra.0884s0009 10.0kb downstream 10.0kb downstream 13242 true Scaffold884: 34948-48189 Capsella grandiflora
Cagra.0884s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold884: 38190-48189 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368643 5261 Brassicaceae View MSA
123833334 5264 Brassicales-Malvales View MSA
124321862 5266 SBM View MSA
124243428 5268 Malvidae View MSA
124074053 5270 Rosid View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain