Gene : Cagra.0884s0010 C. grandiflora v1.1
Defline:  (1 of 1) PF04031 - Las1-like (Las1) Genomic Order:  10
Name:  ? Cagra.0884s0010 Secondary Identifier:  ? PAC:28903871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0884s0010 0.5kb upstream 0.5kb upstream 3787 true Scaffold884: 36962-40748 Capsella grandiflora
Cagra.0884s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold884: 40249-40748 Capsella grandiflora
Cagra.0884s0010 0.5kb downstream 0.5kb downstream 3787 true Scaffold884: 36462-40248 Capsella grandiflora
Cagra.0884s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold884: 36462-36961 Capsella grandiflora
Cagra.0884s0010 1.0kb upstream 1.0kb upstream 4287 true Scaffold884: 36962-41248 Capsella grandiflora
Cagra.0884s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold884: 40249-41248 Capsella grandiflora
Cagra.0884s0010 1.0kb downstream 1.0kb downstream 4287 true Scaffold884: 35962-40248 Capsella grandiflora
Cagra.0884s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold884: 35962-36961 Capsella grandiflora
Cagra.0884s0010 2.0kb upstream 2.0kb upstream 5287 true Scaffold884: 36962-42248 Capsella grandiflora
Cagra.0884s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold884: 40249-42248 Capsella grandiflora
Cagra.0884s0010 2.0kb downstream 2.0kb downstream 5287 true Scaffold884: 34962-40248 Capsella grandiflora
Cagra.0884s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold884: 34962-36961 Capsella grandiflora
Cagra.0884s0010 5.0kb upstream 5.0kb upstream 8287 true Scaffold884: 36962-45248 Capsella grandiflora
Cagra.0884s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold884: 40249-45248 Capsella grandiflora
Cagra.0884s0010 5.0kb downstream 5.0kb downstream 8287 true Scaffold884: 31962-40248 Capsella grandiflora
Cagra.0884s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold884: 31962-36961 Capsella grandiflora
Cagra.0884s0010 10.0kb upstream 10.0kb upstream 13287 true Scaffold884: 36962-50248 Capsella grandiflora
Cagra.0884s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold884: 40249-50248 Capsella grandiflora
Cagra.0884s0010 10.0kb downstream 10.0kb downstream 13287 true Scaffold884: 26962-40248 Capsella grandiflora
Cagra.0884s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold884: 26962-36961 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361294 5261 Brassicaceae View MSA
123831586 5264 Brassicales-Malvales View MSA
124339712 5266 SBM View MSA
124238799 5268 Malvidae View MSA
124060949 5270 Rosid View MSA
123737052 5271 Pentapetalae View MSA
122791609 5272 Eudicot View MSA
122045405 5273 Angiosperm View MSA
121348561 5274 Embryophyte View MSA
123425932 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain