Gene : Cagra.0884s0012 C. grandiflora v1.1
Defline:  (1 of 1) 3.5.2.2 - Dihydropyrimidinase / Hydantoinase Genomic Order:  12
Name:  ? Cagra.0884s0012 Secondary Identifier:  ? PAC:28903870
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3982 Capsella grandiflora pathologic  
Cgrandiflora PWY-6430 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0884s0012 0.5kb upstream 0.5kb upstream 3682 true Scaffold884: 43663-47344 Capsella grandiflora
Cagra.0884s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold884: 43663-44162 Capsella grandiflora
Cagra.0884s0012 0.5kb downstream 0.5kb downstream 3682 true Scaffold884: 44163-47844 Capsella grandiflora
Cagra.0884s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold884: 47345-47844 Capsella grandiflora
Cagra.0884s0012 1.0kb upstream 1.0kb upstream 4182 true Scaffold884: 43163-47344 Capsella grandiflora
Cagra.0884s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold884: 43163-44162 Capsella grandiflora
Cagra.0884s0012 1.0kb downstream 1.0kb downstream 4182 true Scaffold884: 44163-48344 Capsella grandiflora
Cagra.0884s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold884: 47345-48344 Capsella grandiflora
Cagra.0884s0012 2.0kb upstream 2.0kb upstream 5182 true Scaffold884: 42163-47344 Capsella grandiflora
Cagra.0884s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold884: 42163-44162 Capsella grandiflora
Cagra.0884s0012 2.0kb downstream 2.0kb downstream 5182 true Scaffold884: 44163-49344 Capsella grandiflora
Cagra.0884s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold884: 47345-49344 Capsella grandiflora
Cagra.0884s0012 5.0kb upstream 5.0kb upstream 8182 true Scaffold884: 39163-47344 Capsella grandiflora
Cagra.0884s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold884: 39163-44162 Capsella grandiflora
Cagra.0884s0012 5.0kb downstream 5.0kb downstream 8182 true Scaffold884: 44163-52344 Capsella grandiflora
Cagra.0884s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold884: 47345-52344 Capsella grandiflora
Cagra.0884s0012 10.0kb upstream 10.0kb upstream 13182 true Scaffold884: 34163-47344 Capsella grandiflora
Cagra.0884s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold884: 34163-44162 Capsella grandiflora
Cagra.0884s0012 10.0kb downstream 10.0kb downstream 9580 true Scaffold884: 44163-53742 Capsella grandiflora
Cagra.0884s0012 10.0kb downstream 10.0kb downstream 6398 false Scaffold884: 47345-53742 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369486 5261 Brassicaceae View MSA
123828223 5264 Brassicales-Malvales View MSA
124341067 5266 SBM View MSA
124243285 5268 Malvidae View MSA
124064802 5270 Rosid View MSA
123752945 5271 Pentapetalae View MSA
122786753 5272 Eudicot View MSA
122045027 5273 Angiosperm View MSA
121345970 5274 Embryophyte View MSA
123425044 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain