Gene : Cagra.0887s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN Genomic Order:  1
Name:  ? Cagra.0887s0001 Secondary Identifier:  ? PAC:28903280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0887s0001 0.5kb upstream 0.5kb upstream 2180 true Scaffold887: 1-2180 Capsella grandiflora
Cagra.0887s0001 0.5kb upstream 0.5kb upstream 16 false Scaffold887: 1-16 Capsella grandiflora
Cagra.0887s0001 0.5kb downstream 0.5kb downstream 2664 true Scaffold887: 17-2680 Capsella grandiflora
Cagra.0887s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold887: 2181-2680 Capsella grandiflora
Cagra.0887s0001 1.0kb upstream 1.0kb upstream 2180 true Scaffold887: 1-2180 Capsella grandiflora
Cagra.0887s0001 1.0kb upstream 1.0kb upstream 16 false Scaffold887: 1-16 Capsella grandiflora
Cagra.0887s0001 1.0kb downstream 1.0kb downstream 3164 true Scaffold887: 17-3180 Capsella grandiflora
Cagra.0887s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold887: 2181-3180 Capsella grandiflora
Cagra.0887s0001 2.0kb upstream 2.0kb upstream 2180 true Scaffold887: 1-2180 Capsella grandiflora
Cagra.0887s0001 2.0kb upstream 2.0kb upstream 16 false Scaffold887: 1-16 Capsella grandiflora
Cagra.0887s0001 2.0kb downstream 2.0kb downstream 4164 true Scaffold887: 17-4180 Capsella grandiflora
Cagra.0887s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold887: 2181-4180 Capsella grandiflora
Cagra.0887s0001 5.0kb upstream 5.0kb upstream 2180 true Scaffold887: 1-2180 Capsella grandiflora
Cagra.0887s0001 5.0kb upstream 5.0kb upstream 16 false Scaffold887: 1-16 Capsella grandiflora
Cagra.0887s0001 5.0kb downstream 5.0kb downstream 7164 true Scaffold887: 17-7180 Capsella grandiflora
Cagra.0887s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold887: 2181-7180 Capsella grandiflora
Cagra.0887s0001 10.0kb upstream 10.0kb upstream 2180 true Scaffold887: 1-2180 Capsella grandiflora
Cagra.0887s0001 10.0kb upstream 10.0kb upstream 16 false Scaffold887: 1-16 Capsella grandiflora
Cagra.0887s0001 10.0kb downstream 10.0kb downstream 12164 true Scaffold887: 17-12180 Capsella grandiflora
Cagra.0887s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold887: 2181-12180 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511047 5273 Angiosperm View MSA
122371566 5261 Brassicaceae View MSA
123800188 5264 Brassicales-Malvales View MSA
124297632 5266 SBM View MSA
124149468 5268 Malvidae View MSA
123875273 5270 Rosid View MSA
123459125 5271 Pentapetalae View MSA
122494520 5272 Eudicot View MSA
120784115 5274 Embryophyte View MSA
122826051 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain