Gene : Cagra.0887s0012 C. grandiflora v1.1
Defline:  (1 of 5) PTHR22811:SF47 - EMP24/GP25L/P24 FAMILY/GOLD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  12
Name:  ? Cagra.0887s0012 Secondary Identifier:  ? PAC:28903274
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0887s0012 0.5kb upstream 0.5kb upstream 1804 true Scaffold887: 39174-40977 Capsella grandiflora
Cagra.0887s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold887: 39174-39673 Capsella grandiflora
Cagra.0887s0012 0.5kb downstream 0.5kb downstream 1804 true Scaffold887: 39674-41477 Capsella grandiflora
Cagra.0887s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold887: 40978-41477 Capsella grandiflora
Cagra.0887s0012 1.0kb upstream 1.0kb upstream 2304 true Scaffold887: 38674-40977 Capsella grandiflora
Cagra.0887s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold887: 38674-39673 Capsella grandiflora
Cagra.0887s0012 1.0kb downstream 1.0kb downstream 2304 true Scaffold887: 39674-41977 Capsella grandiflora
Cagra.0887s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold887: 40978-41977 Capsella grandiflora
Cagra.0887s0012 2.0kb upstream 2.0kb upstream 3304 true Scaffold887: 37674-40977 Capsella grandiflora
Cagra.0887s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold887: 37674-39673 Capsella grandiflora
Cagra.0887s0012 2.0kb downstream 2.0kb downstream 3304 true Scaffold887: 39674-42977 Capsella grandiflora
Cagra.0887s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold887: 40978-42977 Capsella grandiflora
Cagra.0887s0012 5.0kb upstream 5.0kb upstream 6304 true Scaffold887: 34674-40977 Capsella grandiflora
Cagra.0887s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold887: 34674-39673 Capsella grandiflora
Cagra.0887s0012 5.0kb downstream 5.0kb downstream 6304 true Scaffold887: 39674-45977 Capsella grandiflora
Cagra.0887s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold887: 40978-45977 Capsella grandiflora
Cagra.0887s0012 10.0kb upstream 10.0kb upstream 11304 true Scaffold887: 29674-40977 Capsella grandiflora
Cagra.0887s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold887: 29674-39673 Capsella grandiflora
Cagra.0887s0012 10.0kb downstream 10.0kb downstream 8948 true Scaffold887: 39674-48621 Capsella grandiflora
Cagra.0887s0012 10.0kb downstream 10.0kb downstream 7644 false Scaffold887: 40978-48621 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362568 5261 Brassicaceae View MSA
123798385 5264 Brassicales-Malvales View MSA
124296026 5266 SBM View MSA
124253554 5268 Malvidae View MSA
124070301 5270 Rosid View MSA
123742196 5271 Pentapetalae View MSA
122791106 5272 Eudicot View MSA
122049810 5273 Angiosperm View MSA
121349336 5274 Embryophyte View MSA
123428181 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain