Gene : Cagra.0888s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23359//PTHR23359:SF99 - NUCLEOTIDE KINASE Genomic Order:  11
Name:  ? Cagra.0888s0011 Secondary Identifier:  ? PAC:28909223
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6126 Capsella grandiflora pathologic  
Cgrandiflora PWY-7219 Capsella grandiflora pathologic  
Cgrandiflora PWY-7229 Capsella grandiflora pathologic  
Cgrandiflora PWY-841 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0888s0011 0.5kb upstream 0.5kb upstream 2025 true Scaffold888: 46802-48826 Capsella grandiflora
Cagra.0888s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold888: 46802-47301 Capsella grandiflora
Cagra.0888s0011 0.5kb downstream 0.5kb downstream 2025 true Scaffold888: 47302-49326 Capsella grandiflora
Cagra.0888s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold888: 48827-49326 Capsella grandiflora
Cagra.0888s0011 1.0kb upstream 1.0kb upstream 2525 true Scaffold888: 46302-48826 Capsella grandiflora
Cagra.0888s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold888: 46302-47301 Capsella grandiflora
Cagra.0888s0011 1.0kb downstream 1.0kb downstream 2525 true Scaffold888: 47302-49826 Capsella grandiflora
Cagra.0888s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold888: 48827-49826 Capsella grandiflora
Cagra.0888s0011 2.0kb upstream 2.0kb upstream 3525 true Scaffold888: 45302-48826 Capsella grandiflora
Cagra.0888s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold888: 45302-47301 Capsella grandiflora
Cagra.0888s0011 2.0kb downstream 2.0kb downstream 3525 true Scaffold888: 47302-50826 Capsella grandiflora
Cagra.0888s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold888: 48827-50826 Capsella grandiflora
Cagra.0888s0011 5.0kb upstream 5.0kb upstream 6525 true Scaffold888: 42302-48826 Capsella grandiflora
Cagra.0888s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold888: 42302-47301 Capsella grandiflora
Cagra.0888s0011 5.0kb downstream 5.0kb downstream 6525 true Scaffold888: 47302-53826 Capsella grandiflora
Cagra.0888s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold888: 48827-53826 Capsella grandiflora
Cagra.0888s0011 10.0kb upstream 10.0kb upstream 11525 true Scaffold888: 37302-48826 Capsella grandiflora
Cagra.0888s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold888: 37302-47301 Capsella grandiflora
Cagra.0888s0011 10.0kb downstream 10.0kb downstream 11525 true Scaffold888: 47302-58826 Capsella grandiflora
Cagra.0888s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold888: 48827-58826 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041419 5273 Angiosperm View MSA
122375870 5261 Brassicaceae View MSA
123838087 5264 Brassicales-Malvales View MSA
124351615 5266 SBM View MSA
124244801 5268 Malvidae View MSA
124069606 5270 Rosid View MSA
123746649 5271 Pentapetalae View MSA
122795443 5272 Eudicot View MSA
121350908 5274 Embryophyte View MSA
123427854 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain