Gene : Cagra.0853s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10996//PTHR10996:SF139 - 2-HYDROXYACID DEHYDROGENASE-RELATED Genomic Order:  3
Name:  ? Cagra.0853s0003 Secondary Identifier:  ? PAC:28904480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0853s0003 0.5kb upstream 0.5kb upstream 1915 true Scaffold853: 4715-6629 Capsella grandiflora
Cagra.0853s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold853: 4715-5214 Capsella grandiflora
Cagra.0853s0003 0.5kb downstream 0.5kb downstream 1915 true Scaffold853: 5215-7129 Capsella grandiflora
Cagra.0853s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold853: 6630-7129 Capsella grandiflora
Cagra.0853s0003 1.0kb upstream 1.0kb upstream 2415 true Scaffold853: 4215-6629 Capsella grandiflora
Cagra.0853s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold853: 4215-5214 Capsella grandiflora
Cagra.0853s0003 1.0kb downstream 1.0kb downstream 2415 true Scaffold853: 5215-7629 Capsella grandiflora
Cagra.0853s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold853: 6630-7629 Capsella grandiflora
Cagra.0853s0003 2.0kb upstream 2.0kb upstream 3415 true Scaffold853: 3215-6629 Capsella grandiflora
Cagra.0853s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold853: 3215-5214 Capsella grandiflora
Cagra.0853s0003 2.0kb downstream 2.0kb downstream 3415 true Scaffold853: 5215-8629 Capsella grandiflora
Cagra.0853s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold853: 6630-8629 Capsella grandiflora
Cagra.0853s0003 5.0kb upstream 5.0kb upstream 6415 true Scaffold853: 215-6629 Capsella grandiflora
Cagra.0853s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold853: 215-5214 Capsella grandiflora
Cagra.0853s0003 5.0kb downstream 5.0kb downstream 6415 true Scaffold853: 5215-11629 Capsella grandiflora
Cagra.0853s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold853: 6630-11629 Capsella grandiflora
Cagra.0853s0003 10.0kb upstream 10.0kb upstream 6629 true Scaffold853: 1-6629 Capsella grandiflora
Cagra.0853s0003 10.0kb upstream 10.0kb upstream 5214 false Scaffold853: 1-5214 Capsella grandiflora
Cagra.0853s0003 10.0kb downstream 10.0kb downstream 11415 true Scaffold853: 5215-16629 Capsella grandiflora
Cagra.0853s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold853: 6630-16629 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376442 5261 Brassicaceae View MSA
123828368 5264 Brassicales-Malvales View MSA
124343383 5266 SBM View MSA
124239198 5268 Malvidae View MSA
124066830 5270 Rosid View MSA
123749177 5271 Pentapetalae View MSA
122790806 5272 Eudicot View MSA
122049787 5273 Angiosperm View MSA
121349350 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain