Gene : Cagra.0860s0004 C. grandiflora v1.1
Defline:  (1 of 1) 1.3.1.21 - 7-dehydrocholesterol reductase / Sterol Delta(7)-reductase Genomic Order:  4
Name:  ? Cagra.0860s0004 Secondary Identifier:  ? PAC:28901384
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-2541 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0860s0004 0.5kb upstream 0.5kb upstream 4427 true Scaffold860: 19620-24046 Capsella grandiflora
Cagra.0860s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold860: 19620-20119 Capsella grandiflora
Cagra.0860s0004 0.5kb downstream 0.5kb downstream 4427 true Scaffold860: 20120-24546 Capsella grandiflora
Cagra.0860s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold860: 24047-24546 Capsella grandiflora
Cagra.0860s0004 1.0kb upstream 1.0kb upstream 4927 true Scaffold860: 19120-24046 Capsella grandiflora
Cagra.0860s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold860: 19120-20119 Capsella grandiflora
Cagra.0860s0004 1.0kb downstream 1.0kb downstream 4927 true Scaffold860: 20120-25046 Capsella grandiflora
Cagra.0860s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold860: 24047-25046 Capsella grandiflora
Cagra.0860s0004 2.0kb upstream 2.0kb upstream 5927 true Scaffold860: 18120-24046 Capsella grandiflora
Cagra.0860s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold860: 18120-20119 Capsella grandiflora
Cagra.0860s0004 2.0kb downstream 2.0kb downstream 5927 true Scaffold860: 20120-26046 Capsella grandiflora
Cagra.0860s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold860: 24047-26046 Capsella grandiflora
Cagra.0860s0004 5.0kb upstream 5.0kb upstream 8927 true Scaffold860: 15120-24046 Capsella grandiflora
Cagra.0860s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold860: 15120-20119 Capsella grandiflora
Cagra.0860s0004 5.0kb downstream 5.0kb downstream 8927 true Scaffold860: 20120-29046 Capsella grandiflora
Cagra.0860s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold860: 24047-29046 Capsella grandiflora
Cagra.0860s0004 10.0kb upstream 10.0kb upstream 13927 true Scaffold860: 10120-24046 Capsella grandiflora
Cagra.0860s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold860: 10120-20119 Capsella grandiflora
Cagra.0860s0004 10.0kb downstream 10.0kb downstream 13927 true Scaffold860: 20120-34046 Capsella grandiflora
Cagra.0860s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold860: 24047-34046 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367905 5261 Brassicaceae View MSA
123831848 5264 Brassicales-Malvales View MSA
124345945 5266 SBM View MSA
124241398 5268 Malvidae View MSA
124066966 5270 Rosid View MSA
123738626 5271 Pentapetalae View MSA
122793044 5272 Eudicot View MSA
122045488 5273 Angiosperm View MSA
121344145 5274 Embryophyte View MSA
123426486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain