Gene : Cagra.0860s0006 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10799:SF777 - DNA-BINDING PROTEIN-RELATED Genomic Order:  6
Name:  ? Cagra.0860s0006 Secondary Identifier:  ? PAC:28901404
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0860s0006 0.5kb upstream 0.5kb upstream 6041 true Scaffold860: 28575-34615 Capsella grandiflora
Cagra.0860s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold860: 34116-34615 Capsella grandiflora
Cagra.0860s0006 0.5kb downstream 0.5kb downstream 6041 true Scaffold860: 28075-34115 Capsella grandiflora
Cagra.0860s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold860: 28075-28574 Capsella grandiflora
Cagra.0860s0006 1.0kb upstream 1.0kb upstream 6541 true Scaffold860: 28575-35115 Capsella grandiflora
Cagra.0860s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold860: 34116-35115 Capsella grandiflora
Cagra.0860s0006 1.0kb downstream 1.0kb downstream 6541 true Scaffold860: 27575-34115 Capsella grandiflora
Cagra.0860s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold860: 27575-28574 Capsella grandiflora
Cagra.0860s0006 2.0kb upstream 2.0kb upstream 7541 true Scaffold860: 28575-36115 Capsella grandiflora
Cagra.0860s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold860: 34116-36115 Capsella grandiflora
Cagra.0860s0006 2.0kb downstream 2.0kb downstream 7541 true Scaffold860: 26575-34115 Capsella grandiflora
Cagra.0860s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold860: 26575-28574 Capsella grandiflora
Cagra.0860s0006 5.0kb upstream 5.0kb upstream 10541 true Scaffold860: 28575-39115 Capsella grandiflora
Cagra.0860s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold860: 34116-39115 Capsella grandiflora
Cagra.0860s0006 5.0kb downstream 5.0kb downstream 10541 true Scaffold860: 23575-34115 Capsella grandiflora
Cagra.0860s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold860: 23575-28574 Capsella grandiflora
Cagra.0860s0006 10.0kb upstream 10.0kb upstream 15541 true Scaffold860: 28575-44115 Capsella grandiflora
Cagra.0860s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold860: 34116-44115 Capsella grandiflora
Cagra.0860s0006 10.0kb downstream 10.0kb downstream 15541 true Scaffold860: 18575-34115 Capsella grandiflora
Cagra.0860s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold860: 18575-28574 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373009 5261 Brassicaceae View MSA
123829354 5264 Brassicales-Malvales View MSA
124341270 5266 SBM View MSA
124253553 5268 Malvidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain