Gene : Cagra.0860s0005 C. grandiflora v1.1
Defline:  (1 of 33) PF03514 - GRAS domain family (GRAS) Genomic Order:  5
Name:  ? Cagra.0860s0005 Secondary Identifier:  ? PAC:28901394
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0860s0005 0.5kb upstream 0.5kb upstream 2871 true Scaffold860: 25479-28349 Capsella grandiflora
Cagra.0860s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold860: 25479-25978 Capsella grandiflora
Cagra.0860s0005 0.5kb downstream 0.5kb downstream 2871 true Scaffold860: 25979-28849 Capsella grandiflora
Cagra.0860s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold860: 28350-28849 Capsella grandiflora
Cagra.0860s0005 1.0kb upstream 1.0kb upstream 3371 true Scaffold860: 24979-28349 Capsella grandiflora
Cagra.0860s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold860: 24979-25978 Capsella grandiflora
Cagra.0860s0005 1.0kb downstream 1.0kb downstream 3371 true Scaffold860: 25979-29349 Capsella grandiflora
Cagra.0860s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold860: 28350-29349 Capsella grandiflora
Cagra.0860s0005 2.0kb upstream 2.0kb upstream 4371 true Scaffold860: 23979-28349 Capsella grandiflora
Cagra.0860s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold860: 23979-25978 Capsella grandiflora
Cagra.0860s0005 2.0kb downstream 2.0kb downstream 4371 true Scaffold860: 25979-30349 Capsella grandiflora
Cagra.0860s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold860: 28350-30349 Capsella grandiflora
Cagra.0860s0005 5.0kb upstream 5.0kb upstream 7371 true Scaffold860: 20979-28349 Capsella grandiflora
Cagra.0860s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold860: 20979-25978 Capsella grandiflora
Cagra.0860s0005 5.0kb downstream 5.0kb downstream 7371 true Scaffold860: 25979-33349 Capsella grandiflora
Cagra.0860s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold860: 28350-33349 Capsella grandiflora
Cagra.0860s0005 10.0kb upstream 10.0kb upstream 12371 true Scaffold860: 15979-28349 Capsella grandiflora
Cagra.0860s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold860: 15979-25978 Capsella grandiflora
Cagra.0860s0005 10.0kb downstream 10.0kb downstream 12371 true Scaffold860: 25979-38349 Capsella grandiflora
Cagra.0860s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold860: 28350-38349 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378672 5261 Brassicaceae View MSA
123840903 5264 Brassicales-Malvales View MSA
124350903 5266 SBM View MSA
124245523 5268 Malvidae View MSA
124071733 5270 Rosid View MSA
123743380 5271 Pentapetalae View MSA
122791329 5272 Eudicot View MSA
122043320 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain