Gene : Cagra.0873s0002 C. grandiflora v1.1
Defline:  (1 of 1) 3.4.24.36 - Leishmanolysin / Promastigote surface endopeptidase Genomic Order:  2
Name:  ? Cagra.0873s0002 Secondary Identifier:  ? PAC:28896203
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0873s0002 0.5kb upstream 0.5kb upstream 5115 true Scaffold873: 3139-8253 Capsella grandiflora
Cagra.0873s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold873: 3139-3638 Capsella grandiflora
Cagra.0873s0002 0.5kb downstream 0.5kb downstream 5115 true Scaffold873: 3639-8753 Capsella grandiflora
Cagra.0873s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold873: 8254-8753 Capsella grandiflora
Cagra.0873s0002 1.0kb upstream 1.0kb upstream 5615 true Scaffold873: 2639-8253 Capsella grandiflora
Cagra.0873s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold873: 2639-3638 Capsella grandiflora
Cagra.0873s0002 1.0kb downstream 1.0kb downstream 5615 true Scaffold873: 3639-9253 Capsella grandiflora
Cagra.0873s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold873: 8254-9253 Capsella grandiflora
Cagra.0873s0002 2.0kb upstream 2.0kb upstream 6615 true Scaffold873: 1639-8253 Capsella grandiflora
Cagra.0873s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold873: 1639-3638 Capsella grandiflora
Cagra.0873s0002 2.0kb downstream 2.0kb downstream 6615 true Scaffold873: 3639-10253 Capsella grandiflora
Cagra.0873s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold873: 8254-10253 Capsella grandiflora
Cagra.0873s0002 5.0kb upstream 5.0kb upstream 8253 true Scaffold873: 1-8253 Capsella grandiflora
Cagra.0873s0002 5.0kb upstream 5.0kb upstream 3638 false Scaffold873: 1-3638 Capsella grandiflora
Cagra.0873s0002 5.0kb downstream 5.0kb downstream 9615 true Scaffold873: 3639-13253 Capsella grandiflora
Cagra.0873s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold873: 8254-13253 Capsella grandiflora
Cagra.0873s0002 10.0kb upstream 10.0kb upstream 8253 true Scaffold873: 1-8253 Capsella grandiflora
Cagra.0873s0002 10.0kb upstream 10.0kb upstream 3638 false Scaffold873: 1-3638 Capsella grandiflora
Cagra.0873s0002 10.0kb downstream 10.0kb downstream 14055 true Scaffold873: 3639-17693 Capsella grandiflora
Cagra.0873s0002 10.0kb downstream 10.0kb downstream 9440 false Scaffold873: 8254-17693 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366231 5261 Brassicaceae View MSA
123837183 5264 Brassicales-Malvales View MSA
124345656 5266 SBM View MSA
124239839 5268 Malvidae View MSA
124066332 5270 Rosid View MSA
123746749 5271 Pentapetalae View MSA
122792088 5272 Eudicot View MSA
122046785 5273 Angiosperm View MSA
121346379 5274 Embryophyte View MSA
123425691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain