Gene : Cagra.0873s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31496:SF7 - TRANSCRIPTION REPRESSOR KAN1-RELATED Genomic Order:  3
Name:  ? Cagra.0873s0003 Secondary Identifier:  ? PAC:28896204
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0873s0003 0.5kb upstream 0.5kb upstream 2272 true Scaffold873: 11880-14151 Capsella grandiflora
Cagra.0873s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold873: 13652-14151 Capsella grandiflora
Cagra.0873s0003 0.5kb downstream 0.5kb downstream 2272 true Scaffold873: 11380-13651 Capsella grandiflora
Cagra.0873s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold873: 11380-11879 Capsella grandiflora
Cagra.0873s0003 1.0kb upstream 1.0kb upstream 2772 true Scaffold873: 11880-14651 Capsella grandiflora
Cagra.0873s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold873: 13652-14651 Capsella grandiflora
Cagra.0873s0003 1.0kb downstream 1.0kb downstream 2772 true Scaffold873: 10880-13651 Capsella grandiflora
Cagra.0873s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold873: 10880-11879 Capsella grandiflora
Cagra.0873s0003 2.0kb upstream 2.0kb upstream 3772 true Scaffold873: 11880-15651 Capsella grandiflora
Cagra.0873s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold873: 13652-15651 Capsella grandiflora
Cagra.0873s0003 2.0kb downstream 2.0kb downstream 3772 true Scaffold873: 9880-13651 Capsella grandiflora
Cagra.0873s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold873: 9880-11879 Capsella grandiflora
Cagra.0873s0003 5.0kb upstream 5.0kb upstream 5814 true Scaffold873: 11880-17693 Capsella grandiflora
Cagra.0873s0003 5.0kb upstream 5.0kb upstream 4042 false Scaffold873: 13652-17693 Capsella grandiflora
Cagra.0873s0003 5.0kb downstream 5.0kb downstream 6772 true Scaffold873: 6880-13651 Capsella grandiflora
Cagra.0873s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold873: 6880-11879 Capsella grandiflora
Cagra.0873s0003 10.0kb upstream 10.0kb upstream 5814 true Scaffold873: 11880-17693 Capsella grandiflora
Cagra.0873s0003 10.0kb upstream 10.0kb upstream 4042 false Scaffold873: 13652-17693 Capsella grandiflora
Cagra.0873s0003 10.0kb downstream 10.0kb downstream 11772 true Scaffold873: 1880-13651 Capsella grandiflora
Cagra.0873s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold873: 1880-11879 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364995 5261 Brassicaceae View MSA
123836060 5264 Brassicales-Malvales View MSA
124343046 5266 SBM View MSA
124238676 5268 Malvidae View MSA
124063022 5270 Rosid View MSA
123741195 5271 Pentapetalae View MSA
122791849 5272 Eudicot View MSA
122046873 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349698 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain