Gene : Cagra.0876s0017 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23139//PTHR23139:SF66 - RNA-BINDING PROTEIN Genomic Order:  17
Name:  ? Cagra.0876s0017 Secondary Identifier:  ? PAC:28899247
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0876s0017 0.5kb upstream 0.5kb upstream 3224 true Scaffold876: 49068-52291 Capsella grandiflora
Cagra.0876s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold876: 51792-52291 Capsella grandiflora
Cagra.0876s0017 0.5kb downstream 0.5kb downstream 3224 true Scaffold876: 48568-51791 Capsella grandiflora
Cagra.0876s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold876: 48568-49067 Capsella grandiflora
Cagra.0876s0017 1.0kb upstream 1.0kb upstream 3724 true Scaffold876: 49068-52791 Capsella grandiflora
Cagra.0876s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold876: 51792-52791 Capsella grandiflora
Cagra.0876s0017 1.0kb downstream 1.0kb downstream 3724 true Scaffold876: 48068-51791 Capsella grandiflora
Cagra.0876s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold876: 48068-49067 Capsella grandiflora
Cagra.0876s0017 2.0kb upstream 2.0kb upstream 4724 true Scaffold876: 49068-53791 Capsella grandiflora
Cagra.0876s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold876: 51792-53791 Capsella grandiflora
Cagra.0876s0017 2.0kb downstream 2.0kb downstream 4724 true Scaffold876: 47068-51791 Capsella grandiflora
Cagra.0876s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold876: 47068-49067 Capsella grandiflora
Cagra.0876s0017 5.0kb upstream 5.0kb upstream 7724 true Scaffold876: 49068-56791 Capsella grandiflora
Cagra.0876s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold876: 51792-56791 Capsella grandiflora
Cagra.0876s0017 5.0kb downstream 5.0kb downstream 7724 true Scaffold876: 44068-51791 Capsella grandiflora
Cagra.0876s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold876: 44068-49067 Capsella grandiflora
Cagra.0876s0017 10.0kb upstream 10.0kb upstream 12724 true Scaffold876: 49068-61791 Capsella grandiflora
Cagra.0876s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold876: 51792-61791 Capsella grandiflora
Cagra.0876s0017 10.0kb downstream 10.0kb downstream 12724 true Scaffold876: 39068-51791 Capsella grandiflora
Cagra.0876s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold876: 39068-49067 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365658 5261 Brassicaceae View MSA
123828765 5264 Brassicales-Malvales View MSA
124340867 5266 SBM View MSA
124253511 5268 Malvidae View MSA
124068050 5270 Rosid View MSA
123743802 5271 Pentapetalae View MSA
122790530 5272 Eudicot View MSA
122047712 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310781 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain