Gene : Cagra.0839s0005 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23334 - CCAAT/ENHANCER BINDING PROTEIN Genomic Order:  5
Name:  ? Cagra.0839s0005 Secondary Identifier:  ? PAC:28912227
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0839s0005 0.5kb upstream 0.5kb upstream 2159 true Scaffold839: 12538-14696 Capsella grandiflora
Cagra.0839s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold839: 14197-14696 Capsella grandiflora
Cagra.0839s0005 0.5kb downstream 0.5kb downstream 2159 true Scaffold839: 12038-14196 Capsella grandiflora
Cagra.0839s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold839: 12038-12537 Capsella grandiflora
Cagra.0839s0005 1.0kb upstream 1.0kb upstream 2659 true Scaffold839: 12538-15196 Capsella grandiflora
Cagra.0839s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold839: 14197-15196 Capsella grandiflora
Cagra.0839s0005 1.0kb downstream 1.0kb downstream 2659 true Scaffold839: 11538-14196 Capsella grandiflora
Cagra.0839s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold839: 11538-12537 Capsella grandiflora
Cagra.0839s0005 2.0kb upstream 2.0kb upstream 3659 true Scaffold839: 12538-16196 Capsella grandiflora
Cagra.0839s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold839: 14197-16196 Capsella grandiflora
Cagra.0839s0005 2.0kb downstream 2.0kb downstream 3659 true Scaffold839: 10538-14196 Capsella grandiflora
Cagra.0839s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold839: 10538-12537 Capsella grandiflora
Cagra.0839s0005 5.0kb upstream 5.0kb upstream 6659 true Scaffold839: 12538-19196 Capsella grandiflora
Cagra.0839s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold839: 14197-19196 Capsella grandiflora
Cagra.0839s0005 5.0kb downstream 5.0kb downstream 6659 true Scaffold839: 7538-14196 Capsella grandiflora
Cagra.0839s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold839: 7538-12537 Capsella grandiflora
Cagra.0839s0005 10.0kb upstream 10.0kb upstream 11659 true Scaffold839: 12538-24196 Capsella grandiflora
Cagra.0839s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold839: 14197-24196 Capsella grandiflora
Cagra.0839s0005 10.0kb downstream 10.0kb downstream 11659 true Scaffold839: 2538-14196 Capsella grandiflora
Cagra.0839s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold839: 2538-12537 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364564 5261 Brassicaceae View MSA
123840527 5264 Brassicales-Malvales View MSA
124343012 5266 SBM View MSA
124240098 5268 Malvidae View MSA
124062533 5270 Rosid View MSA
123737163 5271 Pentapetalae View MSA
122793272 5272 Eudicot View MSA
122047570 5273 Angiosperm View MSA
121349674 5274 Embryophyte View MSA
123381395 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain