Gene : Cagra.0836s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12357:SF32 - YTH FAMILY PROTEIN Genomic Order:  4
Name:  ? Cagra.0836s0004 Secondary Identifier:  ? PAC:28895764
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0836s0004 0.5kb upstream 0.5kb upstream 2558 true Scaffold836: 11086-13643 Capsella grandiflora
Cagra.0836s0004 0.5kb upstream 0.5kb upstream 1 false Scaffold836: 13643-13643 Capsella grandiflora
Cagra.0836s0004 0.5kb downstream 0.5kb downstream 3057 true Scaffold836: 10586-13642 Capsella grandiflora
Cagra.0836s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold836: 10586-11085 Capsella grandiflora
Cagra.0836s0004 1.0kb upstream 1.0kb upstream 2558 true Scaffold836: 11086-13643 Capsella grandiflora
Cagra.0836s0004 1.0kb upstream 1.0kb upstream 1 false Scaffold836: 13643-13643 Capsella grandiflora
Cagra.0836s0004 1.0kb downstream 1.0kb downstream 3557 true Scaffold836: 10086-13642 Capsella grandiflora
Cagra.0836s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold836: 10086-11085 Capsella grandiflora
Cagra.0836s0004 2.0kb upstream 2.0kb upstream 2558 true Scaffold836: 11086-13643 Capsella grandiflora
Cagra.0836s0004 2.0kb upstream 2.0kb upstream 1 false Scaffold836: 13643-13643 Capsella grandiflora
Cagra.0836s0004 2.0kb downstream 2.0kb downstream 4557 true Scaffold836: 9086-13642 Capsella grandiflora
Cagra.0836s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold836: 9086-11085 Capsella grandiflora
Cagra.0836s0004 5.0kb upstream 5.0kb upstream 2558 true Scaffold836: 11086-13643 Capsella grandiflora
Cagra.0836s0004 5.0kb upstream 5.0kb upstream 1 false Scaffold836: 13643-13643 Capsella grandiflora
Cagra.0836s0004 5.0kb downstream 5.0kb downstream 7557 true Scaffold836: 6086-13642 Capsella grandiflora
Cagra.0836s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold836: 6086-11085 Capsella grandiflora
Cagra.0836s0004 10.0kb upstream 10.0kb upstream 2558 true Scaffold836: 11086-13643 Capsella grandiflora
Cagra.0836s0004 10.0kb upstream 10.0kb upstream 1 false Scaffold836: 13643-13643 Capsella grandiflora
Cagra.0836s0004 10.0kb downstream 10.0kb downstream 12557 true Scaffold836: 1086-13642 Capsella grandiflora
Cagra.0836s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold836: 1086-11085 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376733 5261 Brassicaceae View MSA
123827985 5264 Brassicales-Malvales View MSA
124346879 5266 SBM View MSA
124239561 5268 Malvidae View MSA
124062891 5270 Rosid View MSA
123739575 5271 Pentapetalae View MSA
122769957 5272 Eudicot View MSA
122045860 5273 Angiosperm View MSA
121348539 5274 Embryophyte View MSA
123380904 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain