Gene : Cagra.0839s0004 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22850:SF82 - HISTONE-BINDING PROTEIN RBBP7 Genomic Order:  4
Name:  ? Cagra.0839s0004 Secondary Identifier:  ? PAC:28912231
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0839s0004 0.5kb upstream 0.5kb upstream 2657 true Scaffold839: 9484-12140 Capsella grandiflora
Cagra.0839s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold839: 9484-9983 Capsella grandiflora
Cagra.0839s0004 0.5kb downstream 0.5kb downstream 2657 true Scaffold839: 9984-12640 Capsella grandiflora
Cagra.0839s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold839: 12141-12640 Capsella grandiflora
Cagra.0839s0004 1.0kb upstream 1.0kb upstream 3157 true Scaffold839: 8984-12140 Capsella grandiflora
Cagra.0839s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold839: 8984-9983 Capsella grandiflora
Cagra.0839s0004 1.0kb downstream 1.0kb downstream 3157 true Scaffold839: 9984-13140 Capsella grandiflora
Cagra.0839s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold839: 12141-13140 Capsella grandiflora
Cagra.0839s0004 2.0kb upstream 2.0kb upstream 4157 true Scaffold839: 7984-12140 Capsella grandiflora
Cagra.0839s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold839: 7984-9983 Capsella grandiflora
Cagra.0839s0004 2.0kb downstream 2.0kb downstream 4157 true Scaffold839: 9984-14140 Capsella grandiflora
Cagra.0839s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold839: 12141-14140 Capsella grandiflora
Cagra.0839s0004 5.0kb upstream 5.0kb upstream 7157 true Scaffold839: 4984-12140 Capsella grandiflora
Cagra.0839s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold839: 4984-9983 Capsella grandiflora
Cagra.0839s0004 5.0kb downstream 5.0kb downstream 7157 true Scaffold839: 9984-17140 Capsella grandiflora
Cagra.0839s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold839: 12141-17140 Capsella grandiflora
Cagra.0839s0004 10.0kb upstream 10.0kb upstream 12140 true Scaffold839: 1-12140 Capsella grandiflora
Cagra.0839s0004 10.0kb upstream 10.0kb upstream 9983 false Scaffold839: 1-9983 Capsella grandiflora
Cagra.0839s0004 10.0kb downstream 10.0kb downstream 12157 true Scaffold839: 9984-22140 Capsella grandiflora
Cagra.0839s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold839: 12141-22140 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026585 5273 Angiosperm View MSA
122373659 5261 Brassicaceae View MSA
123836879 5264 Brassicales-Malvales View MSA
124339438 5266 SBM View MSA
124240099 5268 Malvidae View MSA
124062099 5270 Rosid View MSA
123737896 5271 Pentapetalae View MSA
122786745 5272 Eudicot View MSA
121350438 5274 Embryophyte View MSA
123428491 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain