Gene : Cagra.0844s0005 C. grandiflora v1.1
Defline:  (1 of 1) 3.4.11.2 - Membrane alanyl aminopeptidase / Peptidase E Genomic Order:  5
Name:  ? Cagra.0844s0005 Secondary Identifier:  ? PAC:28914898
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6842 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0844s0005 0.5kb upstream 0.5kb upstream 5278 true Scaffold844: 20555-25832 Capsella grandiflora
Cagra.0844s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold844: 25333-25832 Capsella grandiflora
Cagra.0844s0005 0.5kb downstream 0.5kb downstream 5278 true Scaffold844: 20055-25332 Capsella grandiflora
Cagra.0844s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold844: 20055-20554 Capsella grandiflora
Cagra.0844s0005 1.0kb upstream 1.0kb upstream 5778 true Scaffold844: 20555-26332 Capsella grandiflora
Cagra.0844s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold844: 25333-26332 Capsella grandiflora
Cagra.0844s0005 1.0kb downstream 1.0kb downstream 5778 true Scaffold844: 19555-25332 Capsella grandiflora
Cagra.0844s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold844: 19555-20554 Capsella grandiflora
Cagra.0844s0005 2.0kb upstream 2.0kb upstream 6778 true Scaffold844: 20555-27332 Capsella grandiflora
Cagra.0844s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold844: 25333-27332 Capsella grandiflora
Cagra.0844s0005 2.0kb downstream 2.0kb downstream 6778 true Scaffold844: 18555-25332 Capsella grandiflora
Cagra.0844s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold844: 18555-20554 Capsella grandiflora
Cagra.0844s0005 5.0kb upstream 5.0kb upstream 9778 true Scaffold844: 20555-30332 Capsella grandiflora
Cagra.0844s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold844: 25333-30332 Capsella grandiflora
Cagra.0844s0005 5.0kb downstream 5.0kb downstream 9778 true Scaffold844: 15555-25332 Capsella grandiflora
Cagra.0844s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold844: 15555-20554 Capsella grandiflora
Cagra.0844s0005 10.0kb upstream 10.0kb upstream 14778 true Scaffold844: 20555-35332 Capsella grandiflora
Cagra.0844s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold844: 25333-35332 Capsella grandiflora
Cagra.0844s0005 10.0kb downstream 10.0kb downstream 14778 true Scaffold844: 10555-25332 Capsella grandiflora
Cagra.0844s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold844: 10555-20554 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369903 5261 Brassicaceae View MSA
123833612 5264 Brassicales-Malvales View MSA
124345886 5266 SBM View MSA
124239309 5268 Malvidae View MSA
124064231 5270 Rosid View MSA
123745445 5271 Pentapetalae View MSA
122791441 5272 Eudicot View MSA
122045992 5273 Angiosperm View MSA
121349880 5274 Embryophyte View MSA
123428340 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain