Gene : Cagra.0844s0041 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10625:SF104 - HISTONE DEACETYLASE 6 Genomic Order:  41
Name:  ? Cagra.0844s0041 Secondary Identifier:  ? PAC:28914913
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0844s0041 0.5kb upstream 0.5kb upstream 3219 true Scaffold844: 160484-163702 Capsella grandiflora
Cagra.0844s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold844: 163203-163702 Capsella grandiflora
Cagra.0844s0041 0.5kb downstream 0.5kb downstream 3219 true Scaffold844: 159984-163202 Capsella grandiflora
Cagra.0844s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold844: 159984-160483 Capsella grandiflora
Cagra.0844s0041 1.0kb upstream 1.0kb upstream 3719 true Scaffold844: 160484-164202 Capsella grandiflora
Cagra.0844s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold844: 163203-164202 Capsella grandiflora
Cagra.0844s0041 1.0kb downstream 1.0kb downstream 3719 true Scaffold844: 159484-163202 Capsella grandiflora
Cagra.0844s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold844: 159484-160483 Capsella grandiflora
Cagra.0844s0041 2.0kb upstream 2.0kb upstream 4719 true Scaffold844: 160484-165202 Capsella grandiflora
Cagra.0844s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold844: 163203-165202 Capsella grandiflora
Cagra.0844s0041 2.0kb downstream 2.0kb downstream 4719 true Scaffold844: 158484-163202 Capsella grandiflora
Cagra.0844s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold844: 158484-160483 Capsella grandiflora
Cagra.0844s0041 5.0kb upstream 5.0kb upstream 7719 true Scaffold844: 160484-168202 Capsella grandiflora
Cagra.0844s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold844: 163203-168202 Capsella grandiflora
Cagra.0844s0041 5.0kb downstream 5.0kb downstream 7719 true Scaffold844: 155484-163202 Capsella grandiflora
Cagra.0844s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold844: 155484-160483 Capsella grandiflora
Cagra.0844s0041 10.0kb upstream 10.0kb upstream 12719 true Scaffold844: 160484-173202 Capsella grandiflora
Cagra.0844s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold844: 163203-173202 Capsella grandiflora
Cagra.0844s0041 10.0kb downstream 10.0kb downstream 12719 true Scaffold844: 150484-163202 Capsella grandiflora
Cagra.0844s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold844: 150484-160483 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366414 5261 Brassicaceae View MSA
123836467 5264 Brassicales-Malvales View MSA
124346050 5266 SBM View MSA
124238744 5268 Malvidae View MSA
124061432 5270 Rosid View MSA
123739619 5271 Pentapetalae View MSA
122787508 5272 Eudicot View MSA
122051091 5273 Angiosperm View MSA
121349302 5274 Embryophyte View MSA
123428156 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain