Gene : Cagra.0844s0045 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12320:SF9 - PROTEIN PHOSPHATASE 2C 62-RELATED Genomic Order:  45
Name:  ? Cagra.0844s0045 Secondary Identifier:  ? PAC:28914910
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0844s0045 0.5kb upstream 0.5kb upstream 4351 true Scaffold844: 170629-174979 Capsella grandiflora
Cagra.0844s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold844: 174480-174979 Capsella grandiflora
Cagra.0844s0045 0.5kb downstream 0.5kb downstream 4351 true Scaffold844: 170129-174479 Capsella grandiflora
Cagra.0844s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold844: 170129-170628 Capsella grandiflora
Cagra.0844s0045 1.0kb upstream 1.0kb upstream 4851 true Scaffold844: 170629-175479 Capsella grandiflora
Cagra.0844s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold844: 174480-175479 Capsella grandiflora
Cagra.0844s0045 1.0kb downstream 1.0kb downstream 4851 true Scaffold844: 169629-174479 Capsella grandiflora
Cagra.0844s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold844: 169629-170628 Capsella grandiflora
Cagra.0844s0045 2.0kb upstream 2.0kb upstream 5851 true Scaffold844: 170629-176479 Capsella grandiflora
Cagra.0844s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold844: 174480-176479 Capsella grandiflora
Cagra.0844s0045 2.0kb downstream 2.0kb downstream 5851 true Scaffold844: 168629-174479 Capsella grandiflora
Cagra.0844s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold844: 168629-170628 Capsella grandiflora
Cagra.0844s0045 5.0kb upstream 5.0kb upstream 8851 true Scaffold844: 170629-179479 Capsella grandiflora
Cagra.0844s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold844: 174480-179479 Capsella grandiflora
Cagra.0844s0045 5.0kb downstream 5.0kb downstream 8851 true Scaffold844: 165629-174479 Capsella grandiflora
Cagra.0844s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold844: 165629-170628 Capsella grandiflora
Cagra.0844s0045 10.0kb upstream 10.0kb upstream 13851 true Scaffold844: 170629-184479 Capsella grandiflora
Cagra.0844s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold844: 174480-184479 Capsella grandiflora
Cagra.0844s0045 10.0kb downstream 10.0kb downstream 13851 true Scaffold844: 160629-174479 Capsella grandiflora
Cagra.0844s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold844: 160629-170628 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376220 5261 Brassicaceae View MSA
123837640 5264 Brassicales-Malvales View MSA
124322341 5266 SBM View MSA
124244510 5268 Malvidae View MSA
124063620 5270 Rosid View MSA
123740753 5271 Pentapetalae View MSA
122796169 5272 Eudicot View MSA
122049301 5273 Angiosperm View MSA
121351334 5274 Embryophyte View MSA
123428574 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain