Gene : Cagra.0844s0047 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24093:SF124 - COPPER-TRANSPORTING ATPASE PAA1, CHLOROPLASTIC Genomic Order:  47
Name:  ? Cagra.0844s0047 Secondary Identifier:  ? PAC:28914880
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0844s0047 0.5kb upstream 0.5kb upstream 9008 true Scaffold844: 176629-185636 Capsella grandiflora
Cagra.0844s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold844: 176629-177128 Capsella grandiflora
Cagra.0844s0047 0.5kb downstream 0.5kb downstream 9008 true Scaffold844: 177129-186136 Capsella grandiflora
Cagra.0844s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold844: 185637-186136 Capsella grandiflora
Cagra.0844s0047 1.0kb upstream 1.0kb upstream 9508 true Scaffold844: 176129-185636 Capsella grandiflora
Cagra.0844s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold844: 176129-177128 Capsella grandiflora
Cagra.0844s0047 1.0kb downstream 1.0kb downstream 9508 true Scaffold844: 177129-186636 Capsella grandiflora
Cagra.0844s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold844: 185637-186636 Capsella grandiflora
Cagra.0844s0047 2.0kb upstream 2.0kb upstream 10508 true Scaffold844: 175129-185636 Capsella grandiflora
Cagra.0844s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold844: 175129-177128 Capsella grandiflora
Cagra.0844s0047 2.0kb downstream 2.0kb downstream 10508 true Scaffold844: 177129-187636 Capsella grandiflora
Cagra.0844s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold844: 185637-187636 Capsella grandiflora
Cagra.0844s0047 5.0kb upstream 5.0kb upstream 13508 true Scaffold844: 172129-185636 Capsella grandiflora
Cagra.0844s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold844: 172129-177128 Capsella grandiflora
Cagra.0844s0047 5.0kb downstream 5.0kb downstream 13508 true Scaffold844: 177129-190636 Capsella grandiflora
Cagra.0844s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold844: 185637-190636 Capsella grandiflora
Cagra.0844s0047 10.0kb upstream 10.0kb upstream 18508 true Scaffold844: 167129-185636 Capsella grandiflora
Cagra.0844s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold844: 167129-177128 Capsella grandiflora
Cagra.0844s0047 10.0kb downstream 10.0kb downstream 17438 true Scaffold844: 177129-194566 Capsella grandiflora
Cagra.0844s0047 10.0kb downstream 10.0kb downstream 8930 false Scaffold844: 185637-194566 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376776 5261 Brassicaceae View MSA
123836384 5264 Brassicales-Malvales View MSA
124322156 5266 SBM View MSA
124254253 5268 Malvidae View MSA
124074915 5270 Rosid View MSA
123753356 5271 Pentapetalae View MSA
122796910 5272 Eudicot View MSA
122047959 5273 Angiosperm View MSA
121350289 5274 Embryophyte View MSA
123427971 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain