Gene : Cagra.0846s0017 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31235:SF70 - PEROXIDASE 60 Genomic Order:  17
Name:  ? Cagra.0846s0017 Secondary Identifier:  ? PAC:28905377
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5466 Capsella grandiflora pathologic  
Cgrandiflora PWY-7214 Capsella grandiflora pathologic  
Cgrandiflora PWY-7445 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0846s0017 0.5kb upstream 0.5kb upstream 1791 true Scaffold846: 53133-54923 Capsella grandiflora
Cagra.0846s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold846: 53133-53632 Capsella grandiflora
Cagra.0846s0017 0.5kb downstream 0.5kb downstream 1791 true Scaffold846: 53633-55423 Capsella grandiflora
Cagra.0846s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold846: 54924-55423 Capsella grandiflora
Cagra.0846s0017 1.0kb upstream 1.0kb upstream 2291 true Scaffold846: 52633-54923 Capsella grandiflora
Cagra.0846s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold846: 52633-53632 Capsella grandiflora
Cagra.0846s0017 1.0kb downstream 1.0kb downstream 2291 true Scaffold846: 53633-55923 Capsella grandiflora
Cagra.0846s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold846: 54924-55923 Capsella grandiflora
Cagra.0846s0017 2.0kb upstream 2.0kb upstream 3291 true Scaffold846: 51633-54923 Capsella grandiflora
Cagra.0846s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold846: 51633-53632 Capsella grandiflora
Cagra.0846s0017 2.0kb downstream 2.0kb downstream 3291 true Scaffold846: 53633-56923 Capsella grandiflora
Cagra.0846s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold846: 54924-56923 Capsella grandiflora
Cagra.0846s0017 5.0kb upstream 5.0kb upstream 6291 true Scaffold846: 48633-54923 Capsella grandiflora
Cagra.0846s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold846: 48633-53632 Capsella grandiflora
Cagra.0846s0017 5.0kb downstream 5.0kb downstream 6291 true Scaffold846: 53633-59923 Capsella grandiflora
Cagra.0846s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold846: 54924-59923 Capsella grandiflora
Cagra.0846s0017 10.0kb upstream 10.0kb upstream 11291 true Scaffold846: 43633-54923 Capsella grandiflora
Cagra.0846s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold846: 43633-53632 Capsella grandiflora
Cagra.0846s0017 10.0kb downstream 10.0kb downstream 11291 true Scaffold846: 53633-64923 Capsella grandiflora
Cagra.0846s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold846: 54924-64923 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363507 5261 Brassicaceae View MSA
123834251 5264 Brassicales-Malvales View MSA
124341935 5266 SBM View MSA
124244557 5268 Malvidae View MSA
124063929 5270 Rosid View MSA
123745687 5271 Pentapetalae View MSA
122794580 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain