Gene : Cagra.0846s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23177//PTHR23177:SF26 - MKIAA1688 PROTEIN Genomic Order:  16
Name:  ? Cagra.0846s0016 Secondary Identifier:  ? PAC:28905386
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0846s0016 0.5kb upstream 0.5kb upstream 3171 true Scaffold846: 49848-53018 Capsella grandiflora
Cagra.0846s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold846: 52519-53018 Capsella grandiflora
Cagra.0846s0016 0.5kb downstream 0.5kb downstream 3171 true Scaffold846: 49348-52518 Capsella grandiflora
Cagra.0846s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold846: 49348-49847 Capsella grandiflora
Cagra.0846s0016 1.0kb upstream 1.0kb upstream 3671 true Scaffold846: 49848-53518 Capsella grandiflora
Cagra.0846s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold846: 52519-53518 Capsella grandiflora
Cagra.0846s0016 1.0kb downstream 1.0kb downstream 3671 true Scaffold846: 48848-52518 Capsella grandiflora
Cagra.0846s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold846: 48848-49847 Capsella grandiflora
Cagra.0846s0016 2.0kb upstream 2.0kb upstream 4671 true Scaffold846: 49848-54518 Capsella grandiflora
Cagra.0846s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold846: 52519-54518 Capsella grandiflora
Cagra.0846s0016 2.0kb downstream 2.0kb downstream 4671 true Scaffold846: 47848-52518 Capsella grandiflora
Cagra.0846s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold846: 47848-49847 Capsella grandiflora
Cagra.0846s0016 5.0kb upstream 5.0kb upstream 7671 true Scaffold846: 49848-57518 Capsella grandiflora
Cagra.0846s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold846: 52519-57518 Capsella grandiflora
Cagra.0846s0016 5.0kb downstream 5.0kb downstream 7671 true Scaffold846: 44848-52518 Capsella grandiflora
Cagra.0846s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold846: 44848-49847 Capsella grandiflora
Cagra.0846s0016 10.0kb upstream 10.0kb upstream 12671 true Scaffold846: 49848-62518 Capsella grandiflora
Cagra.0846s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold846: 52519-62518 Capsella grandiflora
Cagra.0846s0016 10.0kb downstream 10.0kb downstream 12671 true Scaffold846: 39848-52518 Capsella grandiflora
Cagra.0846s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold846: 39848-49847 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368270 5261 Brassicaceae View MSA
123837223 5264 Brassicales-Malvales View MSA
124337738 5266 SBM View MSA
124251064 5268 Malvidae View MSA
124070990 5270 Rosid View MSA
123748530 5271 Pentapetalae View MSA
122791760 5272 Eudicot View MSA
122045219 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain