Gene : Cagra.0906s0012 C. grandiflora v1.1
Defline:  (1 of 3) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase Genomic Order:  12
Name:  ? Cagra.0906s0012 Secondary Identifier:  ? PAC:28900103
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ARGININE-SYN4-PWY Capsella grandiflora pathologic  
Cgrandiflora GLUDEG-I-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0906s0012 0.5kb upstream 0.5kb upstream 3203 true Scaffold906: 28400-31602 Capsella grandiflora
Cagra.0906s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold906: 28400-28899 Capsella grandiflora
Cagra.0906s0012 0.5kb downstream 0.5kb downstream 3203 true Scaffold906: 28900-32102 Capsella grandiflora
Cagra.0906s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold906: 31603-32102 Capsella grandiflora
Cagra.0906s0012 1.0kb upstream 1.0kb upstream 3703 true Scaffold906: 27900-31602 Capsella grandiflora
Cagra.0906s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold906: 27900-28899 Capsella grandiflora
Cagra.0906s0012 1.0kb downstream 1.0kb downstream 3703 true Scaffold906: 28900-32602 Capsella grandiflora
Cagra.0906s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold906: 31603-32602 Capsella grandiflora
Cagra.0906s0012 2.0kb upstream 2.0kb upstream 4703 true Scaffold906: 26900-31602 Capsella grandiflora
Cagra.0906s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold906: 26900-28899 Capsella grandiflora
Cagra.0906s0012 2.0kb downstream 2.0kb downstream 4703 true Scaffold906: 28900-33602 Capsella grandiflora
Cagra.0906s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold906: 31603-33602 Capsella grandiflora
Cagra.0906s0012 5.0kb upstream 5.0kb upstream 7703 true Scaffold906: 23900-31602 Capsella grandiflora
Cagra.0906s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold906: 23900-28899 Capsella grandiflora
Cagra.0906s0012 5.0kb downstream 5.0kb downstream 7703 true Scaffold906: 28900-36602 Capsella grandiflora
Cagra.0906s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold906: 31603-36602 Capsella grandiflora
Cagra.0906s0012 10.0kb upstream 10.0kb upstream 12703 true Scaffold906: 18900-31602 Capsella grandiflora
Cagra.0906s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold906: 18900-28899 Capsella grandiflora
Cagra.0906s0012 10.0kb downstream 10.0kb downstream 12703 true Scaffold906: 28900-41602 Capsella grandiflora
Cagra.0906s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold906: 31603-41602 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363964 5261 Brassicaceae View MSA
123840705 5264 Brassicales-Malvales View MSA
124341607 5266 SBM View MSA
124244105 5268 Malvidae View MSA
124067187 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain