Gene : Cagra.0834s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10457:SF11 - GALACTURONOKINASE Genomic Order:  9
Name:  ? Cagra.0834s0009 Secondary Identifier:  ? PAC:28903777
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-4 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0834s0009 0.5kb upstream 0.5kb upstream 3953 true Scaffold834: 26131-30083 Capsella grandiflora
Cagra.0834s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold834: 26131-26630 Capsella grandiflora
Cagra.0834s0009 0.5kb downstream 0.5kb downstream 3953 true Scaffold834: 26631-30583 Capsella grandiflora
Cagra.0834s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold834: 30084-30583 Capsella grandiflora
Cagra.0834s0009 1.0kb upstream 1.0kb upstream 4453 true Scaffold834: 25631-30083 Capsella grandiflora
Cagra.0834s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold834: 25631-26630 Capsella grandiflora
Cagra.0834s0009 1.0kb downstream 1.0kb downstream 4453 true Scaffold834: 26631-31083 Capsella grandiflora
Cagra.0834s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold834: 30084-31083 Capsella grandiflora
Cagra.0834s0009 2.0kb upstream 2.0kb upstream 5453 true Scaffold834: 24631-30083 Capsella grandiflora
Cagra.0834s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold834: 24631-26630 Capsella grandiflora
Cagra.0834s0009 2.0kb downstream 2.0kb downstream 5453 true Scaffold834: 26631-32083 Capsella grandiflora
Cagra.0834s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold834: 30084-32083 Capsella grandiflora
Cagra.0834s0009 5.0kb upstream 5.0kb upstream 8453 true Scaffold834: 21631-30083 Capsella grandiflora
Cagra.0834s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold834: 21631-26630 Capsella grandiflora
Cagra.0834s0009 5.0kb downstream 5.0kb downstream 8453 true Scaffold834: 26631-35083 Capsella grandiflora
Cagra.0834s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold834: 30084-35083 Capsella grandiflora
Cagra.0834s0009 10.0kb upstream 10.0kb upstream 13453 true Scaffold834: 16631-30083 Capsella grandiflora
Cagra.0834s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold834: 16631-26630 Capsella grandiflora
Cagra.0834s0009 10.0kb downstream 10.0kb downstream 13453 true Scaffold834: 26631-40083 Capsella grandiflora
Cagra.0834s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold834: 30084-40083 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363722 5261 Brassicaceae View MSA
123828749 5264 Brassicales-Malvales View MSA
124339525 5266 SBM View MSA
124242560 5268 Malvidae View MSA
124050204 5270 Rosid View MSA
123740556 5271 Pentapetalae View MSA
122789142 5272 Eudicot View MSA
122041803 5273 Angiosperm View MSA
121344936 5274 Embryophyte View MSA
123425309 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain