Gene : Cagra.0834s0013 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24349:SF161 - CALCIUM-DEPENDENT PROTEIN KINASE 1-RELATED Genomic Order:  13
Name:  ? Cagra.0834s0013 Secondary Identifier:  ? PAC:28903779
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0834s0013 0.5kb upstream 0.5kb upstream 3988 true Scaffold834: 43342-47329 Capsella grandiflora
Cagra.0834s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold834: 43342-43841 Capsella grandiflora
Cagra.0834s0013 0.5kb downstream 0.5kb downstream 3988 true Scaffold834: 43842-47829 Capsella grandiflora
Cagra.0834s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold834: 47330-47829 Capsella grandiflora
Cagra.0834s0013 1.0kb upstream 1.0kb upstream 4488 true Scaffold834: 42842-47329 Capsella grandiflora
Cagra.0834s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold834: 42842-43841 Capsella grandiflora
Cagra.0834s0013 1.0kb downstream 1.0kb downstream 4488 true Scaffold834: 43842-48329 Capsella grandiflora
Cagra.0834s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold834: 47330-48329 Capsella grandiflora
Cagra.0834s0013 2.0kb upstream 2.0kb upstream 5488 true Scaffold834: 41842-47329 Capsella grandiflora
Cagra.0834s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold834: 41842-43841 Capsella grandiflora
Cagra.0834s0013 2.0kb downstream 2.0kb downstream 5488 true Scaffold834: 43842-49329 Capsella grandiflora
Cagra.0834s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold834: 47330-49329 Capsella grandiflora
Cagra.0834s0013 5.0kb upstream 5.0kb upstream 8488 true Scaffold834: 38842-47329 Capsella grandiflora
Cagra.0834s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold834: 38842-43841 Capsella grandiflora
Cagra.0834s0013 5.0kb downstream 5.0kb downstream 8488 true Scaffold834: 43842-52329 Capsella grandiflora
Cagra.0834s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold834: 47330-52329 Capsella grandiflora
Cagra.0834s0013 10.0kb upstream 10.0kb upstream 13488 true Scaffold834: 33842-47329 Capsella grandiflora
Cagra.0834s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold834: 33842-43841 Capsella grandiflora
Cagra.0834s0013 10.0kb downstream 10.0kb downstream 13488 true Scaffold834: 43842-57329 Capsella grandiflora
Cagra.0834s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold834: 47330-57329 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373727 5261 Brassicaceae View MSA
123837639 5264 Brassicales-Malvales View MSA
124341307 5266 SBM View MSA
124237354 5268 Malvidae View MSA
124072491 5270 Rosid View MSA
123744459 5271 Pentapetalae View MSA
122794301 5272 Eudicot View MSA
122047309 5273 Angiosperm View MSA
121350946 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain