Gene : Cagra.0834s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR24220:SF85 - ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC Genomic Order:  12
Name:  ? Cagra.0834s0012 Secondary Identifier:  ? PAC:28903809
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0834s0012 0.5kb upstream 0.5kb upstream 2717 true Scaffold834: 40898-43614 Capsella grandiflora
Cagra.0834s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold834: 40898-41397 Capsella grandiflora
Cagra.0834s0012 0.5kb downstream 0.5kb downstream 2717 true Scaffold834: 41398-44114 Capsella grandiflora
Cagra.0834s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold834: 43615-44114 Capsella grandiflora
Cagra.0834s0012 1.0kb upstream 1.0kb upstream 3217 true Scaffold834: 40398-43614 Capsella grandiflora
Cagra.0834s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold834: 40398-41397 Capsella grandiflora
Cagra.0834s0012 1.0kb downstream 1.0kb downstream 3217 true Scaffold834: 41398-44614 Capsella grandiflora
Cagra.0834s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold834: 43615-44614 Capsella grandiflora
Cagra.0834s0012 2.0kb upstream 2.0kb upstream 4217 true Scaffold834: 39398-43614 Capsella grandiflora
Cagra.0834s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold834: 39398-41397 Capsella grandiflora
Cagra.0834s0012 2.0kb downstream 2.0kb downstream 4217 true Scaffold834: 41398-45614 Capsella grandiflora
Cagra.0834s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold834: 43615-45614 Capsella grandiflora
Cagra.0834s0012 5.0kb upstream 5.0kb upstream 7217 true Scaffold834: 36398-43614 Capsella grandiflora
Cagra.0834s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold834: 36398-41397 Capsella grandiflora
Cagra.0834s0012 5.0kb downstream 5.0kb downstream 7217 true Scaffold834: 41398-48614 Capsella grandiflora
Cagra.0834s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold834: 43615-48614 Capsella grandiflora
Cagra.0834s0012 10.0kb upstream 10.0kb upstream 12217 true Scaffold834: 31398-43614 Capsella grandiflora
Cagra.0834s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold834: 31398-41397 Capsella grandiflora
Cagra.0834s0012 10.0kb downstream 10.0kb downstream 12217 true Scaffold834: 41398-53614 Capsella grandiflora
Cagra.0834s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold834: 43615-53614 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334380 5261 Brassicaceae Singleton cluster - no MSA
123840848 5264 Brassicales-Malvales View MSA
124340006 5266 SBM View MSA
124239411 5268 Malvidae View MSA
124064289 5270 Rosid View MSA
123737216 5271 Pentapetalae View MSA
122791638 5272 Eudicot View MSA
122043551 5273 Angiosperm View MSA
121344782 5274 Embryophyte View MSA
123425394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain