Gene : Cagra.0834s0011 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11527:SF140 - PROTEIN RESTRICTED TEV MOVEMENT 2 Genomic Order:  11
Name:  ? Cagra.0834s0011 Secondary Identifier:  ? PAC:28903800
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0834s0011 0.5kb upstream 0.5kb upstream 2113 true Scaffold834: 38888-41000 Capsella grandiflora
Cagra.0834s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold834: 40501-41000 Capsella grandiflora
Cagra.0834s0011 0.5kb downstream 0.5kb downstream 2113 true Scaffold834: 38388-40500 Capsella grandiflora
Cagra.0834s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold834: 38388-38887 Capsella grandiflora
Cagra.0834s0011 1.0kb upstream 1.0kb upstream 2613 true Scaffold834: 38888-41500 Capsella grandiflora
Cagra.0834s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold834: 40501-41500 Capsella grandiflora
Cagra.0834s0011 1.0kb downstream 1.0kb downstream 2613 true Scaffold834: 37888-40500 Capsella grandiflora
Cagra.0834s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold834: 37888-38887 Capsella grandiflora
Cagra.0834s0011 2.0kb upstream 2.0kb upstream 3613 true Scaffold834: 38888-42500 Capsella grandiflora
Cagra.0834s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold834: 40501-42500 Capsella grandiflora
Cagra.0834s0011 2.0kb downstream 2.0kb downstream 3613 true Scaffold834: 36888-40500 Capsella grandiflora
Cagra.0834s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold834: 36888-38887 Capsella grandiflora
Cagra.0834s0011 5.0kb upstream 5.0kb upstream 6613 true Scaffold834: 38888-45500 Capsella grandiflora
Cagra.0834s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold834: 40501-45500 Capsella grandiflora
Cagra.0834s0011 5.0kb downstream 5.0kb downstream 6613 true Scaffold834: 33888-40500 Capsella grandiflora
Cagra.0834s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold834: 33888-38887 Capsella grandiflora
Cagra.0834s0011 10.0kb upstream 10.0kb upstream 11613 true Scaffold834: 38888-50500 Capsella grandiflora
Cagra.0834s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold834: 40501-50500 Capsella grandiflora
Cagra.0834s0011 10.0kb downstream 10.0kb downstream 11613 true Scaffold834: 28888-40500 Capsella grandiflora
Cagra.0834s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold834: 28888-38887 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367668 5261 Brassicaceae View MSA
123799411 5264 Brassicales-Malvales View MSA
124296935 5266 SBM View MSA
124250674 5268 Malvidae View MSA
124074314 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain