Gene : Cagra.0834s0053 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10183 - CALPAIN Genomic Order:  53
Name:  ? Cagra.0834s0053 Secondary Identifier:  ? PAC:28903772
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0834s0053 0.5kb upstream 0.5kb upstream 2317 true Scaffold834: 194686-197002 Capsella grandiflora
Cagra.0834s0053 0.5kb upstream 0.5kb upstream 500 false Scaffold834: 196503-197002 Capsella grandiflora
Cagra.0834s0053 0.5kb downstream 0.5kb downstream 2317 true Scaffold834: 194186-196502 Capsella grandiflora
Cagra.0834s0053 0.5kb downstream 0.5kb downstream 500 false Scaffold834: 194186-194685 Capsella grandiflora
Cagra.0834s0053 1.0kb upstream 1.0kb upstream 2817 true Scaffold834: 194686-197502 Capsella grandiflora
Cagra.0834s0053 1.0kb upstream 1.0kb upstream 1000 false Scaffold834: 196503-197502 Capsella grandiflora
Cagra.0834s0053 1.0kb downstream 1.0kb downstream 2817 true Scaffold834: 193686-196502 Capsella grandiflora
Cagra.0834s0053 1.0kb downstream 1.0kb downstream 1000 false Scaffold834: 193686-194685 Capsella grandiflora
Cagra.0834s0053 2.0kb upstream 2.0kb upstream 3817 true Scaffold834: 194686-198502 Capsella grandiflora
Cagra.0834s0053 2.0kb upstream 2.0kb upstream 2000 false Scaffold834: 196503-198502 Capsella grandiflora
Cagra.0834s0053 2.0kb downstream 2.0kb downstream 3817 true Scaffold834: 192686-196502 Capsella grandiflora
Cagra.0834s0053 2.0kb downstream 2.0kb downstream 2000 false Scaffold834: 192686-194685 Capsella grandiflora
Cagra.0834s0053 5.0kb upstream 5.0kb upstream 6817 true Scaffold834: 194686-201502 Capsella grandiflora
Cagra.0834s0053 5.0kb upstream 5.0kb upstream 5000 false Scaffold834: 196503-201502 Capsella grandiflora
Cagra.0834s0053 5.0kb downstream 5.0kb downstream 6817 true Scaffold834: 189686-196502 Capsella grandiflora
Cagra.0834s0053 5.0kb downstream 5.0kb downstream 5000 false Scaffold834: 189686-194685 Capsella grandiflora
Cagra.0834s0053 10.0kb upstream 10.0kb upstream 11817 true Scaffold834: 194686-206502 Capsella grandiflora
Cagra.0834s0053 10.0kb upstream 10.0kb upstream 10000 false Scaffold834: 196503-206502 Capsella grandiflora
Cagra.0834s0053 10.0kb downstream 10.0kb downstream 11817 true Scaffold834: 184686-196502 Capsella grandiflora
Cagra.0834s0053 10.0kb downstream 10.0kb downstream 10000 false Scaffold834: 184686-194685 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369343 5261 Brassicaceae View MSA
123836587 5264 Brassicales-Malvales View MSA
124338746 5266 SBM View MSA
124239848 5268 Malvidae View MSA
124064338 5270 Rosid View MSA
123744145 5271 Pentapetalae View MSA
122790435 5272 Eudicot View MSA
122044402 5273 Angiosperm View MSA
121345695 5274 Embryophyte View MSA
123427497 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain